RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 DCAF8L2P0C7V8 631 aa25.05■■□□□ 1.6
SEMA6D-208ENST00000558014 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
SEMA6D-208ENST00000558014 NISCHQ9Y2I1 1504 aa22.95■■□□□ 1.26
SEMA6D-208ENST00000558014 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
SEMA6D-208ENST00000558014 SHROOM4Q9ULL8 1493 aa22.79■■□□□ 1.24
SEMA6D-208ENST00000558014 TTBK1Q5TCY1 1321 aaPredicted RBP21.95■■□□□ 1.1
SEMA6D-208ENST00000558014 RANGAP1P46060 587 aaPredicted RBP21.94■■□□□ 1.1
SEMA6D-208ENST00000558014 FAM9AQ8IZU1 332 aaPredicted RBP21.92■■□□□ 1.1
SEMA6D-208ENST00000558014 APLP2Q06481 763 aa21.85■■□□□ 1.09
SEMA6D-208ENST00000558014 ATP1B4Q9UN42 357 aaPredicted RBP21.7■■□□□ 1.06
SEMA6D-208ENST00000558014 TRIM41Q8WV44 630 aa21.14■□□□□ 0.97
SEMA6D-208ENST00000558014 UBTFP17480 764 aaKnown RBP21.13■□□□□ 0.97
SEMA6D-208ENST00000558014 PCGF6Q9BYE7 350 aa21.12■□□□□ 0.97
SEMA6D-208ENST00000558014 MYT1LQ9UL68 1186 aa21.11■□□□□ 0.97
SEMA6D-208ENST00000558014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.96■□□□□ 0.95
SEMA6D-208ENST00000558014 HNRNPUL2Q1KMD3 747 aaKnown RBP20.96■□□□□ 0.95
SEMA6D-208ENST00000558014 CHIC1Q5VXU3 224 aa20.94■□□□□ 0.94
SEMA6D-208ENST00000558014 PPARGC1BQ86YN6 1023 aaKnown RBP20.87■□□□□ 0.93
SEMA6D-208ENST00000558014 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
SEMA6D-208ENST00000558014 CCER1Q8TC90 406 aaPredicted RBP20.73■□□□□ 0.91
SEMA6D-208ENST00000558014 ITGAEP38570 1179 aa20.67■□□□□ 0.9
SEMA6D-208ENST00000558014 PABPN1Q86U42 306 aaKnown RBP eCLIP20.62■□□□□ 0.89
SEMA6D-208ENST00000558014 POLR3GLQ9BT43 218 aa20.58■□□□□ 0.89
SEMA6D-208ENST00000558014 CNGB1Q14028 1251 aaPredicted RBP20.52■□□□□ 0.88
SEMA6D-208ENST00000558014 ABCC9O60706 1549 aa20.46■□□□□ 0.87
SEMA6D-208ENST00000558014 SLC4A1APQ9BWU0 796 aaKnown RBP20.39■□□□□ 0.85
SEMA6D-208ENST00000558014 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
SEMA6D-208ENST00000558014 FBLN2P98095 1184 aa20.35■□□□□ 0.85
SEMA6D-208ENST00000558014 ERICH6Q7L0X2 663 aa20.29■□□□□ 0.84
SEMA6D-208ENST00000558014 CENPBP07199 599 aaPredicted RBP20.11■□□□□ 0.81
SEMA6D-208ENST00000558014 LOC105371045A0A1W2PR82 267 aa20.09■□□□□ 0.81
SEMA6D-208ENST00000558014 NEFLP07196 543 aa20.07■□□□□ 0.8
SEMA6D-208ENST00000558014 ZEB1P37275 1124 aaPredicted RBP20.05■□□□□ 0.8
SEMA6D-208ENST00000558014 ARID3CA6NKF2 412 aa20.04■□□□□ 0.8
SEMA6D-208ENST00000558014 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
SEMA6D-208ENST00000558014 FAM50AQ14320 339 aaKnown RBP19.99■□□□□ 0.79
SEMA6D-208ENST00000558014 BCANQ96GW7 911 aa19.94■□□□□ 0.78
SEMA6D-208ENST00000558014 TRIM52Q96A61 297 aa19.93■□□□□ 0.78
SEMA6D-208ENST00000558014 ZNF326Q5BKZ1 582 aaKnown RBP19.83■□□□□ 0.76
SEMA6D-208ENST00000558014 P3H3Q8IVL6 736 aa19.81■□□□□ 0.76
SEMA6D-208ENST00000558014 SLC24A1O60721 1099 aa19.79■□□□□ 0.76
SEMA6D-208ENST00000558014 TRIM26Q12899 539 aaPredicted RBP19.73■□□□□ 0.75
SEMA6D-208ENST00000558014 NEUROD1Q13562 356 aa19.73■□□□□ 0.75
SEMA6D-208ENST00000558014 ZNF777Q9ULD5 760 aaPredicted RBP19.66■□□□□ 0.74
SEMA6D-208ENST00000558014 BCL11AQ9H165 835 aa19.65■□□□□ 0.74
SEMA6D-208ENST00000558014 DAXXQ9UER7 740 aaPredicted RBP19.64■□□□□ 0.74
SEMA6D-208ENST00000558014 ESF1Q9H501 851 aaKnown RBP19.59■□□□□ 0.73
SEMA6D-208ENST00000558014 CLSPNQ9HAW4 1339 aa19.52■□□□□ 0.72
SEMA6D-208ENST00000558014 CHGAP10645 457 aaKnown RBP19.47■□□□□ 0.71
SEMA6D-208ENST00000558014 NPM1P06748 294 aaKnown RBP eCLIP19.45■□□□□ 0.7
SEMA6D-208ENST00000558014 STAG3Q9UJ98 1225 aa19.45■□□□□ 0.7
SEMA6D-208ENST00000558014 HRCP23327 699 aa19.4■□□□□ 0.7
SEMA6D-208ENST00000558014 SENP3Q9H4L4 574 aaPredicted RBP19.4■□□□□ 0.7
SEMA6D-208ENST00000558014 MYT1Q01538 1121 aa19.36■□□□□ 0.69
SEMA6D-208ENST00000558014 PLEKHG5O94827 1062 aa19.33■□□□□ 0.69
SEMA6D-208ENST00000558014 SCAF1Q9H7N4 1312 aaKnown RBP19.3■□□□□ 0.68
SEMA6D-208ENST00000558014 A0A0G2JS52 829 aa19.24■□□□□ 0.67
SEMA6D-208ENST00000558014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.22■□□□□ 0.67
SEMA6D-208ENST00000558014 SCRIBQ14160 1630 aa19.22■□□□□ 0.67
SEMA6D-208ENST00000558014 ZBTB47Q9UFB7 747 aaPredicted RBP19.22■□□□□ 0.67
SEMA6D-208ENST00000558014 NEFMP07197 916 aa19.2■□□□□ 0.66
SEMA6D-208ENST00000558014 CDK11AQ9UQ88 783 aaPredicted RBP19.19■□□□□ 0.66
SEMA6D-208ENST00000558014 ZNF316A6NFI3 1004 aaPredicted RBP19.19■□□□□ 0.66
SEMA6D-208ENST00000558014 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
SEMA6D-208ENST00000558014 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.65
SEMA6D-208ENST00000558014 DIEXFQ68CQ4 756 aaKnown RBP19.1■□□□□ 0.65
SEMA6D-208ENST00000558014 CSRNP3Q8WYN3 585 aa19.09■□□□□ 0.65
SEMA6D-208ENST00000558014 CHIC2Q9UKJ5 165 aa19.09■□□□□ 0.65
SEMA6D-208ENST00000558014 ZBTB7CA1YPR0 619 aa19.09■□□□□ 0.65
SEMA6D-208ENST00000558014 KCNH8Q96L42 1107 aa19.09■□□□□ 0.65
SEMA6D-208ENST00000558014 ANP32CO43423 234 aa19.05■□□□□ 0.64
SEMA6D-208ENST00000558014 ARID4BQ4LE39 1312 aaPredicted RBP19.03■□□□□ 0.64
SEMA6D-208ENST00000558014 ZCCHC6Q5VYS8 1495 aaKnown RBP19■□□□□ 0.63
SEMA6D-208ENST00000558014 C14orf37Q86TY3 774 aa18.98■□□□□ 0.63
SEMA6D-208ENST00000558014 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
SEMA6D-208ENST00000558014 CCDC180Q9P1Z9 1646 aa18.95■□□□□ 0.62
SEMA6D-208ENST00000558014 KDM2AQ9Y2K7 1162 aa18.91■□□□□ 0.62
SEMA6D-208ENST00000558014 SALL2Q9Y467 1007 aaPredicted RBP18.89■□□□□ 0.62
SEMA6D-208ENST00000558014 PPP1R15AO75807 674 aaPredicted RBP18.86■□□□□ 0.61
SEMA6D-208ENST00000558014 HAP1P54257 671 aaPredicted RBP18.83■□□□□ 0.6
SEMA6D-208ENST00000558014 TSPY4P0CV99 314 aa18.82■□□□□ 0.6
SEMA6D-208ENST00000558014 TSPY10P0CW01 314 aa18.82■□□□□ 0.6
SEMA6D-208ENST00000558014 RTL5Q5HYW3 569 aaPredicted RBP18.8■□□□□ 0.6
SEMA6D-208ENST00000558014 ERCC6Q03468 1493 aa18.74■□□□□ 0.59
SEMA6D-208ENST00000558014 TONSLQ96HA7 1378 aa18.71■□□□□ 0.59
SEMA6D-208ENST00000558014 LMOD2Q6P5Q4 547 aa18.7■□□□□ 0.58
SEMA6D-208ENST00000558014 ARXQ96QS3 562 aa18.7■□□□□ 0.58
SEMA6D-208ENST00000558014 NPM2Q86SE8 214 aaKnown RBP18.68■□□□□ 0.58
SEMA6D-208ENST00000558014 RRP7BPQ9NSQ0 103 aa18.68■□□□□ 0.58
SEMA6D-208ENST00000558014 MLECQ14165 292 aa18.67■□□□□ 0.58
SEMA6D-208ENST00000558014 MTUS2Q5JR59 1369 aa18.67■□□□□ 0.58
SEMA6D-208ENST00000558014 FAM9BQ8IZU0 186 aa18.66■□□□□ 0.58
SEMA6D-208ENST00000558014 RGL3Q3MIN7 710 aa18.65■□□□□ 0.58
SEMA6D-208ENST00000558014 PLEKHD1A6NEE1 506 aa18.64■□□□□ 0.57
SEMA6D-208ENST00000558014 TMC1Q8TDI8 760 aa18.62■□□□□ 0.57
SEMA6D-208ENST00000558014 RB1CC1Q8TDY2 1594 aa18.62■□□□□ 0.57
SEMA6D-208ENST00000558014 HIRIP3Q9BW71 556 aaPredicted RBP18.61■□□□□ 0.57
SEMA6D-208ENST00000558014 DDX10Q13206 875 aaKnown RBP18.57■□□□□ 0.56
SEMA6D-208ENST00000558014 PPM1GO15355 546 aaPredicted RBP18.55■□□□□ 0.56
SEMA6D-208ENST00000558014 SENP3-EIF4A1A0A087X0R7 540 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms