Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOEP02649 AC079336.7-201ENST00000623428 1078 ntBASIC14.75□□□□□ -0.05
APOEP02649 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
APOEP02649 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOEP02649 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOEP02649 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
APOEP02649 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOEP02649 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.75□□□□□ -0.05
APOEP02649 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOEP02649 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOEP02649 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOEP02649 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
APOEP02649 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOEP02649 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.75□□□□□ -0.05
APOEP02649 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.75□□□□□ -0.05
APOEP02649 RPL13AP3-202ENST00000494676 1473 ntBASIC14.75□□□□□ -0.05
APOEP02649 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOEP02649 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOEP02649 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
APOEP02649 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.75□□□□□ -0.05
APOEP02649 MARK2P16-201ENST00000605714 1723 ntBASIC14.75□□□□□ -0.05
APOEP02649 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
APOEP02649 KRT8P31-201ENST00000504812 1408 ntBASIC14.75□□□□□ -0.05
APOEP02649 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
APOEP02649 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 OR2K2-202ENST00000374428 1038 ntBASIC14.74□□□□□ -0.05
APOEP02649 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.74□□□□□ -0.05
APOEP02649 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.74□□□□□ -0.05
APOEP02649 AC234782.1-201ENST00000451950 919 ntBASIC14.74□□□□□ -0.05
APOEP02649 CHCHD2P2-201ENST00000503744 321 ntBASIC14.74□□□□□ -0.05
APOEP02649 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.74□□□□□ -0.05
APOEP02649 AC134698.3-201ENST00000523880 214 ntBASIC14.74□□□□□ -0.05
APOEP02649 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.74□□□□□ -0.05
APOEP02649 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
APOEP02649 AC007326.1-201ENST00000604539 458 ntBASIC14.74□□□□□ -0.05
APOEP02649 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
APOEP02649 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.74□□□□□ -0.05
APOEP02649 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.74□□□□□ -0.05
APOEP02649 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
APOEP02649 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.74□□□□□ -0.05
APOEP02649 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
APOEP02649 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
APOEP02649 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.74□□□□□ -0.05
APOEP02649 AC073548.1-201ENST00000624088 1882 ntBASIC14.74□□□□□ -0.05
APOEP02649 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
APOEP02649 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
APOEP02649 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOEP02649 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
APOEP02649 CAP2P1-201ENST00000557743 1390 ntBASIC14.73□□□□□ -0.05
APOEP02649 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOEP02649 AC015909.5-201ENST00000624336 2266 ntBASIC14.73□□□□□ -0.05
APOEP02649 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOEP02649 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
APOEP02649 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.73□□□□□ -0.05
APOEP02649 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOEP02649 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.73□□□□□ -0.05
APOEP02649 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.73□□□□□ -0.05
APOEP02649 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOEP02649 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
APOEP02649 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOEP02649 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.73□□□□□ -0.05
APOEP02649 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.73□□□□□ -0.05
APOEP02649 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.73□□□□□ -0.05
APOEP02649 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOEP02649 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOEP02649 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOEP02649 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.73□□□□□ -0.05
APOEP02649 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.73□□□□□ -0.05
APOEP02649 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
APOEP02649 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.73□□□□□ -0.05
APOEP02649 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.73□□□□□ -0.05
APOEP02649 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
APOEP02649 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.73□□□□□ -0.05
APOEP02649 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.73□□□□□ -0.05
APOEP02649 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.73□□□□□ -0.05
APOEP02649 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.73□□□□□ -0.05
APOEP02649 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOEP02649 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.73□□□□□ -0.05
APOEP02649 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
APOEP02649 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms