Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CCL19Q99731 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCL19Q99731 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCL19Q99731 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCL19Q99731 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCL19Q99731 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.76□□□□□ -0.53
CCL19Q99731 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.76□□□□□ -0.53
CCL19Q99731 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCL19Q99731 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CCL19Q99731 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC11.76□□□□□ -0.53
CCL19Q99731 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CCL19Q99731 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC11.76□□□□□ -0.53
CCL19Q99731 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CCL19Q99731 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.75□□□□□ -0.53
CCL19Q99731 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CCL19Q99731 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CCL19Q99731 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
CCL19Q99731 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CCL19Q99731 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CCL19Q99731 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.75□□□□□ -0.53
CCL19Q99731 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CCL19Q99731 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
CCL19Q99731 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
CCL19Q99731 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC11.75□□□□□ -0.53
CCL19Q99731 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 AC005722.1-201ENST00000431878 964 ntBASIC11.75□□□□□ -0.53
CCL19Q99731 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC11.75□□□□□ -0.53
CCL19Q99731 ALG1L7P-201ENST00000502317 768 ntBASIC11.75□□□□□ -0.53
CCL19Q99731 SEPHS2P1-201ENST00000511618 1162 ntBASIC11.75□□□□□ -0.53
CCL19Q99731 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC11.75□□□□□ -0.53
CCL19Q99731 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC11.75□□□□□ -0.53
CCL19Q99731 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC11.75□□□□□ -0.53
CCL19Q99731 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC11.75□□□□□ -0.53
CCL19Q99731 AL359219.1-201ENST00000556311 934 ntBASIC11.75□□□□□ -0.53
CCL19Q99731 FAM187B2P-201ENST00000577135 713 ntBASIC11.75□□□□□ -0.53
CCL19Q99731 AC126755.5-201ENST00000622756 267 ntBASIC11.75□□□□□ -0.53
CCL19Q99731 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
CCL19Q99731 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 TUBB8P4-201ENST00000511806 1324 ntBASIC11.75□□□□□ -0.53
CCL19Q99731 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.75□□□□□ -0.53
CCL19Q99731 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC11.75□□□□□ -0.53
CCL19Q99731 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC11.75□□□□□ -0.53
CCL19Q99731 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC11.75□□□□□ -0.53
CCL19Q99731 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.75□□□□□ -0.53
CCL19Q99731 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC11.75□□□□□ -0.53
CCL19Q99731 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CCL19Q99731 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC11.74□□□□□ -0.53
CCL19Q99731 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.74□□□□□ -0.53
CCL19Q99731 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CCL19Q99731 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCL19Q99731 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCL19Q99731 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CCL19Q99731 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CCL19Q99731 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.74□□□□□ -0.53
CCL19Q99731 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCL19Q99731 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC11.74□□□□□ -0.53
CCL19Q99731 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
CCL19Q99731 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCL19Q99731 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC11.74□□□□□ -0.53
CCL19Q99731 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CCL19Q99731 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.74□□□□□ -0.53
CCL19Q99731 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC11.74□□□□□ -0.53
CCL19Q99731 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
CCL19Q99731 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCL19Q99731 U3.5-201ENST00000363448 216 ntBASIC11.74□□□□□ -0.53
CCL19Q99731 AC106827.1-201ENST00000366454 431 ntBASIC11.74□□□□□ -0.53
CCL19Q99731 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCL19Q99731 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC11.74□□□□□ -0.53
CCL19Q99731 NALT1-202ENST00000450304 437 ntTSL 3 BASIC11.74□□□□□ -0.53
CCL19Q99731 AC104212.2-201ENST00000478813 628 ntBASIC11.74□□□□□ -0.53
CCL19Q99731 AC023906.1-201ENST00000486386 453 ntBASIC11.74□□□□□ -0.53
CCL19Q99731 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC11.74□□□□□ -0.53
CCL19Q99731 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC11.74□□□□□ -0.53
CCL19Q99731 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC11.74□□□□□ -0.53
CCL19Q99731 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
CCL19Q99731 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC11.74□□□□□ -0.53
CCL19Q99731 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC11.74□□□□□ -0.53
CCL19Q99731 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CCL19Q99731 AC131212.3-201ENST00000624087 4219 ntBASIC11.74□□□□□ -0.53
CCL19Q99731 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC11.74□□□□□ -0.53
CCL19Q99731 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms