Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPASTQ9UBP0 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 FP325330.2-201ENST00000624219 5630 ntBASIC14.09□□□□□ -0.15
SPASTQ9UBP0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 MYADML-201ENST00000474610 2147 ntBASIC14.09□□□□□ -0.15
SPASTQ9UBP0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 NDUFS6P1-201ENST00000485187 316 ntBASIC14.09□□□□□ -0.15
SPASTQ9UBP0 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 DNM1P30-201ENST00000563586 452 ntBASIC14.09□□□□□ -0.15
SPASTQ9UBP0 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPASTQ9UBP0 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
SPASTQ9UBP0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
SPASTQ9UBP0 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPASTQ9UBP0 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPASTQ9UBP0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.08□□□□□ -0.15
SPASTQ9UBP0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SPASTQ9UBP0 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
SPASTQ9UBP0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SPASTQ9UBP0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.08□□□□□ -0.15
SPASTQ9UBP0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 AC073869.2-201ENST00000417338 1026 ntBASIC14.08□□□□□ -0.16
SPASTQ9UBP0 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 MIR4750-201ENST00000584564 56 ntBASIC14.08□□□□□ -0.16
SPASTQ9UBP0 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SPASTQ9UBP0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SPASTQ9UBP0 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms