Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.93□□□□□ -0.02
CD248Q9HCU0 AC006453.1-201ENST00000636037 1257 ntBASIC14.93□□□□□ -0.02
CD248Q9HCU0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD248Q9HCU0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD248Q9HCU0 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
CD248Q9HCU0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.93□□□□□ -0.02
CD248Q9HCU0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD248Q9HCU0 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD248Q9HCU0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD248Q9HCU0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.93□□□□□ -0.02
CD248Q9HCU0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD248Q9HCU0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CD248Q9HCU0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.93□□□□□ -0.02
CD248Q9HCU0 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CD248Q9HCU0 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 FTLP1-201ENST00000449155 526 ntBASIC14.92□□□□□ -0.02
CD248Q9HCU0 AC073150.1-201ENST00000450406 1084 ntBASIC14.92□□□□□ -0.02
CD248Q9HCU0 AL353637.1-201ENST00000451571 732 ntBASIC14.92□□□□□ -0.02
CD248Q9HCU0 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CD248Q9HCU0 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.92□□□□□ -0.02
CD248Q9HCU0 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CD248Q9HCU0 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
CD248Q9HCU0 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms