Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 RN7SL767P-201ENST00000493013 295 ntBASIC16.49■□□□□ 0.23
STAG1Q8WVM7 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 KRT8P2-201ENST00000556193 944 ntBASIC16.49■□□□□ 0.23
STAG1Q8WVM7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 U62317.3-201ENST00000608319 855 ntBASIC16.49■□□□□ 0.23
STAG1Q8WVM7 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 NRADDP-202ENST00000641269 1585 ntBASIC16.49■□□□□ 0.23
STAG1Q8WVM7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
STAG1Q8WVM7 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 PPP1R26P4-201ENST00000619065 3527 ntBASIC16.48■□□□□ 0.23
STAG1Q8WVM7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 RPL17P11-201ENST00000417593 544 ntBASIC16.48■□□□□ 0.23
STAG1Q8WVM7 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 AC253536.4-201ENST00000440539 267 ntBASIC16.48■□□□□ 0.23
STAG1Q8WVM7 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 HERC2P11-201ENST00000562845 725 ntBASIC16.48■□□□□ 0.23
STAG1Q8WVM7 AC100756.2-201ENST00000569537 736 ntBASIC16.48■□□□□ 0.23
STAG1Q8WVM7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
STAG1Q8WVM7 NCLP1-201ENST00000445357 1963 ntBASIC16.47■□□□□ 0.23
STAG1Q8WVM7 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 AC130686.1-201ENST00000622936 2466 ntBASIC16.47■□□□□ 0.23
STAG1Q8WVM7 SBF1P1-201ENST00000444527 5631 ntBASIC16.47■□□□□ 0.23
STAG1Q8WVM7 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 AC007279.1-201ENST00000448547 837 ntBASIC16.47■□□□□ 0.23
STAG1Q8WVM7 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC16.47■□□□□ 0.23
STAG1Q8WVM7 SNORD3B-1-201ENST00000577988 758 ntBASIC16.47■□□□□ 0.23
STAG1Q8WVM7 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms