Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GABRA3P34903 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
GABRA3P34903 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.13□□□□□ -0.31
GABRA3P34903 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
GABRA3P34903 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.13□□□□□ -0.31
GABRA3P34903 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
GABRA3P34903 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GABRA3P34903 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
GABRA3P34903 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
GABRA3P34903 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.13□□□□□ -0.31
GABRA3P34903 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
GABRA3P34903 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
GABRA3P34903 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.12□□□□□ -0.31
GABRA3P34903 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 AC073548.1-201ENST00000624088 1882 ntBASIC13.12□□□□□ -0.31
GABRA3P34903 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
GABRA3P34903 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.12□□□□□ -0.31
GABRA3P34903 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.12□□□□□ -0.31
GABRA3P34903 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
GABRA3P34903 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.12□□□□□ -0.31
GABRA3P34903 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
GABRA3P34903 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.12□□□□□ -0.31
GABRA3P34903 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
GABRA3P34903 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
GABRA3P34903 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
GABRA3P34903 GPAA1P2-201ENST00000417923 928 ntBASIC13.12□□□□□ -0.31
GABRA3P34903 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.12□□□□□ -0.31
GABRA3P34903 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.12□□□□□ -0.31
GABRA3P34903 ZNF767P-206ENST00000513792 565 ntBASIC13.12□□□□□ -0.31
GABRA3P34903 SCARNA20.5-201ENST00000516991 142 ntBASIC13.12□□□□□ -0.31
GABRA3P34903 PACS1-203ENST00000524815 628 ntTSL 4 BASIC13.12□□□□□ -0.31
GABRA3P34903 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.12□□□□□ -0.31
GABRA3P34903 KRT8P1-201ENST00000557533 1207 ntBASIC13.12□□□□□ -0.31
GABRA3P34903 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.12□□□□□ -0.31
GABRA3P34903 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.12□□□□□ -0.31
GABRA3P34903 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.12□□□□□ -0.31
GABRA3P34903 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.12□□□□□ -0.31
GABRA3P34903 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
GABRA3P34903 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.12□□□□□ -0.31
GABRA3P34903 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
GABRA3P34903 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 NCLP1-201ENST00000445357 1963 ntBASIC13.12□□□□□ -0.31
GABRA3P34903 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.12□□□□□ -0.31
GABRA3P34903 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
GABRA3P34903 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.12□□□□□ -0.31
GABRA3P34903 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
GABRA3P34903 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
GABRA3P34903 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
GABRA3P34903 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 AC005014.1-201ENST00000432006 2976 ntBASIC13.11□□□□□ -0.31
GABRA3P34903 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.11□□□□□ -0.31
GABRA3P34903 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
GABRA3P34903 AC138028.6-201ENST00000616106 1482 ntBASIC13.11□□□□□ -0.31
GABRA3P34903 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.11□□□□□ -0.31
GABRA3P34903 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
GABRA3P34903 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GABRA3P34903 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GABRA3P34903 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
GABRA3P34903 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GABRA3P34903 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
GABRA3P34903 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
GABRA3P34903 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
GABRA3P34903 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
GABRA3P34903 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
GABRA3P34903 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.11□□□□□ -0.31
GABRA3P34903 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms