RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 NISCHQ9Y2I1 1504 aa36.66■■■■□ 3.46
SCARNA20.5-201ENST00000516991 CCDC180Q9P1Z9 1646 aa32.99■■■□□ 2.87
SCARNA20.5-201ENST00000516991 ABCC9O60706 1549 aa32.83■■■□□ 2.85
SCARNA20.5-201ENST00000516991 RB1CC1Q8TDY2 1594 aa31.36■■■□□ 2.61
SCARNA20.5-201ENST00000516991 NACADO15069 1562 aa31.15■■■□□ 2.58
SCARNA20.5-201ENST00000516991 DCAF8L2P0C7V8 631 aa30.79■■■□□ 2.52
SCARNA20.5-201ENST00000516991 MYO15BQ96JP2 1530 aa30.76■■■□□ 2.51
SCARNA20.5-201ENST00000516991 DNAJC5BQ9UF47 199 aa30.67■■■□□ 2.5
SCARNA20.5-201ENST00000516991 UNC13AQ9UPW8 1703 aa30.6■■■□□ 2.49
SCARNA20.5-201ENST00000516991 PABPN1Q86U42 306 aaKnown RBP eCLIP30.49■■■□□ 2.47
SCARNA20.5-201ENST00000516991 ZCCHC6Q5VYS8 1495 aaKnown RBP30.41■■■□□ 2.46
SCARNA20.5-201ENST00000516991 BICRAQ9NZM4 1560 aa30.38■■■□□ 2.45
SCARNA20.5-201ENST00000516991 DCAF1Q9Y4B6 1507 aa30.36■■■□□ 2.45
SCARNA20.5-201ENST00000516991 SHROOM4Q9ULL8 1493 aa30.12■■■□□ 2.41
SCARNA20.5-201ENST00000516991 SCRIBQ14160 1630 aa29.96■■■□□ 2.39
SCARNA20.5-201ENST00000516991 CC2D2AQ9P2K1 1620 aa29.69■■■□□ 2.34
SCARNA20.5-201ENST00000516991 EIF4G1Q04637 1599 aaKnown RBP29.65■■■□□ 2.34
SCARNA20.5-201ENST00000516991 CECR2Q9BXF3 1484 aa29.61■■■□□ 2.33
SCARNA20.5-201ENST00000516991 NCAPD3P42695 1498 aa28.72■■■□□ 2.19
SCARNA20.5-201ENST00000516991 SMARCA4P51532 1647 aa28.61■■■□□ 2.17
SCARNA20.5-201ENST00000516991 ATAD2BQ9ULI0 1458 aa28.61■■■□□ 2.17
SCARNA20.5-201ENST00000516991 SMARCA2P51531 1590 aa28.6■■■□□ 2.17
SCARNA20.5-201ENST00000516991 HMGXB3Q12766 1538 aa28.56■■■□□ 2.16
SCARNA20.5-201ENST00000516991 BAZ1AQ9NRL2 1556 aaPredicted RBP28.5■■■□□ 2.15
SCARNA20.5-201ENST00000516991 ERCC6Q03468 1493 aa28.4■■■□□ 2.14
SCARNA20.5-201ENST00000516991 CUX2O14529 1486 aa28.39■■■□□ 2.13
SCARNA20.5-201ENST00000516991 PEG3Q9GZU2 1588 aa28.37■■■□□ 2.13
SCARNA20.5-201ENST00000516991 BAZ1BQ9UIG0 1483 aaKnown RBP28.36■■■□□ 2.13
SCARNA20.5-201ENST00000516991 DNAJC5Q9H3Z4 198 aa28.24■■■□□ 2.11
SCARNA20.5-201ENST00000516991 MROH2BQ7Z745 1585 aa28.21■■■□□ 2.11
SCARNA20.5-201ENST00000516991 NESP48681 1621 aa28.18■■■□□ 2.1
SCARNA20.5-201ENST00000516991 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
SCARNA20.5-201ENST00000516991 THOC2Q8NI27 1593 aaKnown RBP27.99■■■□□ 2.07
SCARNA20.5-201ENST00000516991 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
SCARNA20.5-201ENST00000516991 KIF21AQ7Z4S6 1674 aa27.89■■■□□ 2.06
SCARNA20.5-201ENST00000516991 WIZO95785 1651 aa27.87■■■□□ 2.05
SCARNA20.5-201ENST00000516991 CADPSQ9ULU8 1353 aa27.82■■■□□ 2.04
SCARNA20.5-201ENST00000516991 MRC2Q9UBG0 1479 aa27.68■■■□□ 2.02
SCARNA20.5-201ENST00000516991 RSF1Q96T23 1441 aaPredicted RBP27.64■■■□□ 2.02
SCARNA20.5-201ENST00000516991 WDR62O43379 1518 aa27.62■■■□□ 2.01
SCARNA20.5-201ENST00000516991 TOP2AP11388 1531 aaKnown RBP27.59■■■□□ 2.01
SCARNA20.5-201ENST00000516991 CEP164Q9UPV0 1460 aa27.58■■■□□ 2.01
SCARNA20.5-201ENST00000516991 CFTRP13569 1480 aa27.52■■■□□ 2
SCARNA20.5-201ENST00000516991 FANCD2Q9BXW9 1451 aa27.52■■■□□ 2
SCARNA20.5-201ENST00000516991 PRDM2Q13029 1718 aa27.33■■□□□ 1.97
SCARNA20.5-201ENST00000516991 URB2Q14146 1524 aaKnown RBP27.27■■□□□ 1.96
SCARNA20.5-201ENST00000516991 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.95
SCARNA20.5-201ENST00000516991 IFT140Q96RY7 1462 aa27.02■■□□□ 1.92
SCARNA20.5-201ENST00000516991 ABCC8Q09428 1581 aa27.01■■□□□ 1.91
SCARNA20.5-201ENST00000516991 TOPBP1Q92547 1522 aa27■■□□□ 1.91
SCARNA20.5-201ENST00000516991 OSCARQ8IYS5 282 aa26.99■■□□□ 1.91
SCARNA20.5-201ENST00000516991 TRIM41Q8WV44 630 aa26.97■■□□□ 1.91
SCARNA20.5-201ENST00000516991 DNMBPQ6XZF7 1577 aa26.94■■□□□ 1.9
SCARNA20.5-201ENST00000516991 ZNF608Q9ULD9 1512 aaPredicted RBP26.9■■□□□ 1.9
SCARNA20.5-201ENST00000516991 EIF4G3O43432 1585 aaKnown RBP26.84■■□□□ 1.89
SCARNA20.5-201ENST00000516991 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
SCARNA20.5-201ENST00000516991 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
SCARNA20.5-201ENST00000516991 RIMBP3CA6NJZ7 1639 aa26.69■■□□□ 1.86
SCARNA20.5-201ENST00000516991 RIMBP3BA6NNM3 1639 aa26.69■■□□□ 1.86
SCARNA20.5-201ENST00000516991 RIMBP3Q9UFD9 1639 aa26.69■■□□□ 1.86
SCARNA20.5-201ENST00000516991 AQRO60306 1485 aaKnown RBP eCLIP26.64■■□□□ 1.86
SCARNA20.5-201ENST00000516991 CHD1O14646 1710 aa26.62■■□□□ 1.85
SCARNA20.5-201ENST00000516991 ARHGEF11O15085 1522 aa26.61■■□□□ 1.85
SCARNA20.5-201ENST00000516991 WDR97A6NE52 1622 aa26.6■■□□□ 1.85
SCARNA20.5-201ENST00000516991 SOGA1O94964 1423 aa26.57■■□□□ 1.84
SCARNA20.5-201ENST00000516991 RAD54L2Q9Y4B4 1467 aa26.56■■□□□ 1.84
SCARNA20.5-201ENST00000516991 FGD5Q6ZNL6 1462 aa26.55■■□□□ 1.84
SCARNA20.5-201ENST00000516991 CUX1P39880 1505 aa26.53■■□□□ 1.84
SCARNA20.5-201ENST00000516991 TDRD9Q8NDG6 1382 aaKnown RBP26.48■■□□□ 1.83
SCARNA20.5-201ENST00000516991 FBLN2P98095 1184 aa26.45■■□□□ 1.82
SCARNA20.5-201ENST00000516991 SNAPC4Q5SXM2 1469 aa26.44■■□□□ 1.82
SCARNA20.5-201ENST00000516991 MAGI1Q96QZ7 1491 aaPredicted RBP26.42■■□□□ 1.82
SCARNA20.5-201ENST00000516991 GRIN2BQ13224 1484 aa26.39■■□□□ 1.82
SCARNA20.5-201ENST00000516991 ARAP1Q96P48 1450 aa26.35■■□□□ 1.81
SCARNA20.5-201ENST00000516991 SYNJ1O43426 1573 aa26.33■■□□□ 1.81
SCARNA20.5-201ENST00000516991 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.81
SCARNA20.5-201ENST00000516991 CLASP1Q7Z460 1538 aa26.33■■□□□ 1.81
SCARNA20.5-201ENST00000516991 CYB5RLQ6IPT4 315 aa26.32■■□□□ 1.8
SCARNA20.5-201ENST00000516991 PBRM1Q86U86 1689 aa26.31■■□□□ 1.8
SCARNA20.5-201ENST00000516991 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
SCARNA20.5-201ENST00000516991 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
SCARNA20.5-201ENST00000516991 GAPVD1Q14C86 1478 aa26.28■■□□□ 1.8
SCARNA20.5-201ENST00000516991 ABCA10Q8WWZ4 1543 aa26.28■■□□□ 1.8
SCARNA20.5-201ENST00000516991 ABCA5Q8WWZ7 1642 aa26.25■■□□□ 1.79
SCARNA20.5-201ENST00000516991 WRNQ14191 1432 aaPredicted RBP eCLIP26.17■■□□□ 1.78
SCARNA20.5-201ENST00000516991 BIVM-ERCC5R4GMW8 1640 aa26.16■■□□□ 1.78
SCARNA20.5-201ENST00000516991 TOP2BQ02880 1626 aa26.14■■□□□ 1.78
SCARNA20.5-201ENST00000516991 ADAMTS12P58397 1594 aa26.06■■□□□ 1.76
SCARNA20.5-201ENST00000516991 GRIN2AQ12879 1464 aa26.04■■□□□ 1.76
SCARNA20.5-201ENST00000516991 TRHP20396 242 aaPredicted RBP26.04■■□□□ 1.76
SCARNA20.5-201ENST00000516991 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
SCARNA20.5-201ENST00000516991 FHAD1B1AJZ9 1412 aa25.97■■□□□ 1.75
SCARNA20.5-201ENST00000516991 NUP160Q12769 1436 aa25.97■■□□□ 1.75
SCARNA20.5-201ENST00000516991 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
SCARNA20.5-201ENST00000516991 SHROOM2Q13796 1616 aa25.86■■□□□ 1.73
SCARNA20.5-201ENST00000516991 ERCC6L2Q5T890 1561 aa25.83■■□□□ 1.73
SCARNA20.5-201ENST00000516991 RUSC2Q8N2Y8 1516 aa25.69■■□□□ 1.7
SCARNA20.5-201ENST00000516991 PRG4Q92954 1404 aaPredicted RBP25.67■■□□□ 1.7
SCARNA20.5-201ENST00000516991 KIF27Q86VH2 1401 aa25.63■■□□□ 1.69
SCARNA20.5-201ENST00000516991 CUL7Q14999 1698 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms