Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLR3DP05423 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR3DP05423 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.83■□□□□ 0.28
POLR3DP05423 HIST2H2BA-201ENST00000412169 381 ntBASIC16.83■□□□□ 0.28
POLR3DP05423 GUSBP10-201ENST00000417412 665 ntBASIC16.83■□□□□ 0.28
POLR3DP05423 BEND3P1-201ENST00000421591 1944 ntBASIC16.83■□□□□ 0.28
POLR3DP05423 SCARNA12-201ENST00000459155 270 ntBASIC16.83■□□□□ 0.28
POLR3DP05423 RPL18AP3-201ENST00000462885 528 ntBASIC16.83■□□□□ 0.28
POLR3DP05423 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLR3DP05423 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.83■□□□□ 0.28
POLR3DP05423 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLR3DP05423 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.83■□□□□ 0.28
POLR3DP05423 DNM1P30-201ENST00000563586 452 ntBASIC16.83■□□□□ 0.28
POLR3DP05423 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.83■□□□□ 0.28
POLR3DP05423 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.83■□□□□ 0.28
POLR3DP05423 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.83■□□□□ 0.28
POLR3DP05423 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
POLR3DP05423 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR3DP05423 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.83■□□□□ 0.28
POLR3DP05423 AC005618.3-201ENST00000624928 458 ntBASIC16.83■□□□□ 0.28
POLR3DP05423 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.83■□□□□ 0.28
POLR3DP05423 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
POLR3DP05423 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
POLR3DP05423 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
POLR3DP05423 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
POLR3DP05423 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.83■□□□□ 0.28
POLR3DP05423 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR3DP05423 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLR3DP05423 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
POLR3DP05423 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.83■□□□□ 0.28
POLR3DP05423 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC16.83■□□□□ 0.28
POLR3DP05423 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR3DP05423 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.82■□□□□ 0.28
POLR3DP05423 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
POLR3DP05423 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
POLR3DP05423 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR3DP05423 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
POLR3DP05423 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 SHMT1P1-201ENST00000419974 1312 ntBASIC16.82■□□□□ 0.28
POLR3DP05423 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.82■□□□□ 0.28
POLR3DP05423 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.82■□□□□ 0.28
POLR3DP05423 RPL17P11-201ENST00000417593 544 ntBASIC16.82■□□□□ 0.28
POLR3DP05423 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.82■□□□□ 0.28
POLR3DP05423 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR3DP05423 AC018638.5-201ENST00000450885 754 ntBASIC16.82■□□□□ 0.28
POLR3DP05423 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.82■□□□□ 0.28
POLR3DP05423 LDHBP1-201ENST00000455730 1119 ntBASIC16.82■□□□□ 0.28
POLR3DP05423 GOLGA2P8-201ENST00000505201 779 ntBASIC16.82■□□□□ 0.28
POLR3DP05423 AC095040.1-201ENST00000513286 675 ntBASIC16.82■□□□□ 0.28
POLR3DP05423 OR5BD1P-201ENST00000532527 817 ntBASIC16.82■□□□□ 0.28
POLR3DP05423 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
POLR3DP05423 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR3DP05423 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.82■□□□□ 0.28
POLR3DP05423 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR3DP05423 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR3DP05423 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR3DP05423 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR3DP05423 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
POLR3DP05423 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR3DP05423 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
POLR3DP05423 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 TCAM1P-207ENST00000485295 1537 ntBASIC16.81■□□□□ 0.28
POLR3DP05423 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR3DP05423 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR3DP05423 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR3DP05423 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR3DP05423 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR3DP05423 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR3DP05423 PYY2-201ENST00000315776 282 ntBASIC16.81■□□□□ 0.28
POLR3DP05423 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms