Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 MIR3677-201ENST00000578964 60 ntBASIC10.9□□□□□ -0.66
TRBV12-3P01733 NAT9-220ENST00000582870 896 ntTSL 5 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 CICP4-201ENST00000447359 2812 ntBASIC10.9□□□□□ -0.66
TRBV12-3P01733 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC10.9□□□□□ -0.66
TRBV12-3P01733 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
TRBV12-3P01733 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC10.9□□□□□ -0.67
TRBV12-3P01733 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
TRBV12-3P01733 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC10.9□□□□□ -0.67
TRBV12-3P01733 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
TRBV12-3P01733 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
TRBV12-3P01733 BEND3P1-201ENST00000421591 1944 ntBASIC10.9□□□□□ -0.67
TRBV12-3P01733 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
TRBV12-3P01733 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC10.9□□□□□ -0.67
TRBV12-3P01733 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
TRBV12-3P01733 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 AC061965.1-201ENST00000560524 1465 ntBASIC10.89□□□□□ -0.67
TRBV12-3P01733 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 RN7SL720P-201ENST00000488178 304 ntBASIC10.89□□□□□ -0.67
TRBV12-3P01733 IGLV3-15-201ENST00000518356 244 ntBASIC10.89□□□□□ -0.67
TRBV12-3P01733 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 AC007326.1-201ENST00000604539 458 ntBASIC10.89□□□□□ -0.67
TRBV12-3P01733 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 KRT8P31-201ENST00000504812 1408 ntBASIC10.89□□□□□ -0.67
TRBV12-3P01733 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 USP3-204ENST00000540797 5474 ntTSL 2 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 PTENP1-202ENST00000532280 3996 ntBASIC10.89□□□□□ -0.67
TRBV12-3P01733 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 FAM90A2P-201ENST00000511144 1395 ntBASIC10.89□□□□□ -0.67
TRBV12-3P01733 FAM90A25P-201ENST00000528404 1395 ntBASIC10.89□□□□□ -0.67
TRBV12-3P01733 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
TRBV12-3P01733 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
TRBV12-3P01733 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
TRBV12-3P01733 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
TRBV12-3P01733 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms