Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA1Q9UND3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
NPIPA1Q9UND3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
NPIPA1Q9UND3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA1Q9UND3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
NPIPA1Q9UND3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.08□□□□□ -0.31
NPIPA1Q9UND3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.08□□□□□ -0.31
NPIPA1Q9UND3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 HSPA8P5-201ENST00000456928 2069 ntBASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 RPSAP31-201ENST00000416648 895 ntBASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 AC005586.2-201ENST00000563946 837 ntBASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 AC007881.3-201ENST00000608897 607 ntBASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 AL022334.2-201ENST00000610000 484 ntBASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 PTENP1-202ENST00000532280 3996 ntBASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 AL359881.3-201ENST00000602640 1721 ntBASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NPIPA1Q9UND3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 Z69890.1-201ENST00000382990 339 ntBASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 AL627422.1-201ENST00000434104 580 ntBASIC13.07□□□□□ -0.32
NPIPA1Q9UND3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms