Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
PPP3CBP16298 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PPP3CBP16298 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.8□□□□□ -0.36
PPP3CBP16298 KRT8P24-201ENST00000560290 1559 ntBASIC12.8□□□□□ -0.36
PPP3CBP16298 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PPP3CBP16298 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PPP3CBP16298 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
PPP3CBP16298 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PPP3CBP16298 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PPP3CBP16298 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.8□□□□□ -0.36
PPP3CBP16298 AC020658.7-201ENST00000624274 2442 ntBASIC12.8□□□□□ -0.36
PPP3CBP16298 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
PPP3CBP16298 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PPP3CBP16298 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.8□□□□□ -0.36
PPP3CBP16298 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
PPP3CBP16298 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
PPP3CBP16298 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
PPP3CBP16298 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.8□□□□□ -0.36
PPP3CBP16298 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PPP3CBP16298 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.8□□□□□ -0.36
PPP3CBP16298 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PPP3CBP16298 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
PPP3CBP16298 AC114271.1-201ENST00000612689 2813 ntBASIC12.8□□□□□ -0.36
PPP3CBP16298 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
PPP3CBP16298 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
PPP3CBP16298 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PPP3CBP16298 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.79□□□□□ -0.36
PPP3CBP16298 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
PPP3CBP16298 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.79□□□□□ -0.36
PPP3CBP16298 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.79□□□□□ -0.36
PPP3CBP16298 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
PPP3CBP16298 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 HLA-DQB2-229ENST00000411527 1059 ntBASIC12.79□□□□□ -0.36
PPP3CBP16298 ACTG1P2-201ENST00000415776 1125 ntBASIC12.79□□□□□ -0.36
PPP3CBP16298 ACTG1P11-201ENST00000425411 1125 ntBASIC12.79□□□□□ -0.36
PPP3CBP16298 ISCA2P1-201ENST00000425548 448 ntBASIC12.79□□□□□ -0.36
PPP3CBP16298 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.79□□□□□ -0.36
PPP3CBP16298 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.79□□□□□ -0.36
PPP3CBP16298 IMP3P2-201ENST00000489760 475 ntBASIC12.79□□□□□ -0.36
PPP3CBP16298 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC12.79□□□□□ -0.36
PPP3CBP16298 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.79□□□□□ -0.36
PPP3CBP16298 AC079328.1-201ENST00000560358 952 ntBASIC12.79□□□□□ -0.36
PPP3CBP16298 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.79□□□□□ -0.36
PPP3CBP16298 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.79□□□□□ -0.36
PPP3CBP16298 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.79□□□□□ -0.36
PPP3CBP16298 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.79□□□□□ -0.36
PPP3CBP16298 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
PPP3CBP16298 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.79□□□□□ -0.36
PPP3CBP16298 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.79□□□□□ -0.36
PPP3CBP16298 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.79□□□□□ -0.36
PPP3CBP16298 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 BEND3P3-201ENST00000611030 2440 ntBASIC12.79□□□□□ -0.36
PPP3CBP16298 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
PPP3CBP16298 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.79□□□□□ -0.36
PPP3CBP16298 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PPP3CBP16298 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 KRT8P21-201ENST00000430398 1491 ntBASIC12.78□□□□□ -0.36
PPP3CBP16298 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
PPP3CBP16298 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PPP3CBP16298 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PPP3CBP16298 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.78□□□□□ -0.36
PPP3CBP16298 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PPP3CBP16298 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PPP3CBP16298 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
PPP3CBP16298 ELK2AP-201ENST00000392510 1007 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms