Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.52■□□□□ 0.56
COMMD1Q8N668 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.52■□□□□ 0.56
COMMD1Q8N668 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
COMMD1Q8N668 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD1Q8N668 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD1Q8N668 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COMMD1Q8N668 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COMMD1Q8N668 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
COMMD1Q8N668 AC007375.3-201ENST00000600936 2314 ntBASIC18.51■□□□□ 0.55
COMMD1Q8N668 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
COMMD1Q8N668 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD1Q8N668 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD1Q8N668 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
COMMD1Q8N668 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.51■□□□□ 0.55
COMMD1Q8N668 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.51■□□□□ 0.55
COMMD1Q8N668 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.51■□□□□ 0.55
COMMD1Q8N668 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD1Q8N668 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD1Q8N668 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD1Q8N668 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD1Q8N668 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD1Q8N668 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
COMMD1Q8N668 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD1Q8N668 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
COMMD1Q8N668 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD1Q8N668 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
COMMD1Q8N668 Z92544.1-202ENST00000571933 1220 ntBASIC18.5■□□□□ 0.55
COMMD1Q8N668 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD1Q8N668 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD1Q8N668 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD1Q8N668 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD1Q8N668 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
COMMD1Q8N668 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD1Q8N668 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD1Q8N668 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD1Q8N668 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD1Q8N668 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD1Q8N668 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COMMD1Q8N668 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
COMMD1Q8N668 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD1Q8N668 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD1Q8N668 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COMMD1Q8N668 AC011551.1-201ENST00000614101 683 ntBASIC18.49■□□□□ 0.55
COMMD1Q8N668 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD1Q8N668 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD1Q8N668 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD1Q8N668 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.49■□□□□ 0.55
COMMD1Q8N668 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.49■□□□□ 0.55
COMMD1Q8N668 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD1Q8N668 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COMMD1Q8N668 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD1Q8N668 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD1Q8N668 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD1Q8N668 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD1Q8N668 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
COMMD1Q8N668 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
COMMD1Q8N668 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD1Q8N668 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD1Q8N668 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD1Q8N668 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD1Q8N668 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD1Q8N668 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.48■□□□□ 0.55
COMMD1Q8N668 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD1Q8N668 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
COMMD1Q8N668 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.48■□□□□ 0.55
COMMD1Q8N668 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD1Q8N668 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD1Q8N668 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.47■□□□□ 0.55
COMMD1Q8N668 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD1Q8N668 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD1Q8N668 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD1Q8N668 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.47■□□□□ 0.55
COMMD1Q8N668 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.47■□□□□ 0.55
COMMD1Q8N668 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COMMD1Q8N668 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.47■□□□□ 0.55
COMMD1Q8N668 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.47■□□□□ 0.55
COMMD1Q8N668 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD1Q8N668 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
COMMD1Q8N668 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.47■□□□□ 0.55
COMMD1Q8N668 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
COMMD1Q8N668 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
COMMD1Q8N668 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD1Q8N668 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD1Q8N668 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD1Q8N668 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.46■□□□□ 0.55
COMMD1Q8N668 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
COMMD1Q8N668 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD1Q8N668 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.46■□□□□ 0.55
COMMD1Q8N668 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD1Q8N668 BX664725.1-201ENST00000438252 379 ntBASIC18.46■□□□□ 0.55
COMMD1Q8N668 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD1Q8N668 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.46■□□□□ 0.55
COMMD1Q8N668 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD1Q8N668 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
COMMD1Q8N668 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD1Q8N668 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.46■□□□□ 0.55
COMMD1Q8N668 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD1Q8N668 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
COMMD1Q8N668 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COMMD1Q8N668 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms