Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.12■□□□□ 0.33
RAB4AP20338 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB4AP20338 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RAB4AP20338 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RAB4AP20338 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB4AP20338 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB4AP20338 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.12■□□□□ 0.33
RAB4AP20338 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RAB4AP20338 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4AP20338 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4AP20338 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4AP20338 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4AP20338 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RAB4AP20338 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.11■□□□□ 0.33
RAB4AP20338 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RAB4AP20338 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.11■□□□□ 0.33
RAB4AP20338 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4AP20338 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4AP20338 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4AP20338 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4AP20338 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4AP20338 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4AP20338 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4AP20338 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB4AP20338 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB4AP20338 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB4AP20338 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4AP20338 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RAB4AP20338 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4AP20338 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4AP20338 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB4AP20338 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB4AP20338 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4AP20338 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4AP20338 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAB4AP20338 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4AP20338 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RAB4AP20338 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4AP20338 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.1■□□□□ 0.33
RAB4AP20338 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4AP20338 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4AP20338 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4AP20338 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RAB4AP20338 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
RAB4AP20338 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAB4AP20338 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4AP20338 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4AP20338 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB4AP20338 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.1■□□□□ 0.33
RAB4AP20338 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
RAB4AP20338 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB4AP20338 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB4AP20338 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RAB4AP20338 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB4AP20338 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RAB4AP20338 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB4AP20338 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB4AP20338 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB4AP20338 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RAB4AP20338 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB4AP20338 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB4AP20338 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB4AP20338 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB4AP20338 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB4AP20338 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB4AP20338 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB4AP20338 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB4AP20338 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB4AP20338 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RAB4AP20338 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB4AP20338 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAB4AP20338 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RAB4AP20338 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB4AP20338 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB4AP20338 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.08■□□□□ 0.33
RAB4AP20338 AL359258.2-201ENST00000564063 1566 ntBASIC17.08■□□□□ 0.32
RAB4AP20338 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB4AP20338 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB4AP20338 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB4AP20338 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB4AP20338 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB4AP20338 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
RAB4AP20338 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB4AP20338 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB4AP20338 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB4AP20338 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB4AP20338 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB4AP20338 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB4AP20338 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB4AP20338 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB4AP20338 MIR219A2-201ENST00000608502 1504 ntBASIC17.07■□□□□ 0.32
RAB4AP20338 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RAB4AP20338 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB4AP20338 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB4AP20338 AC087741.3-201ENST00000624270 1347 ntBASIC17.07■□□□□ 0.32
RAB4AP20338 HCG11-201ENST00000411553 5696 ntBASIC17.07■□□□□ 0.32
RAB4AP20338 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB4AP20338 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB4AP20338 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB4AP20338 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms