Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
PER3P56645 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.24□□□□□ -0.29
PER3P56645 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
PER3P56645 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.24□□□□□ -0.29
PER3P56645 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
PER3P56645 AC009093.2-202ENST00000620513 2079 ntBASIC13.24□□□□□ -0.29
PER3P56645 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.24□□□□□ -0.29
PER3P56645 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
PER3P56645 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.24□□□□□ -0.29
PER3P56645 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 AL008718.2-201ENST00000609206 1313 ntBASIC13.24□□□□□ -0.29
PER3P56645 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
PER3P56645 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
PER3P56645 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
PER3P56645 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
PER3P56645 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
PER3P56645 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.24□□□□□ -0.29
PER3P56645 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
PER3P56645 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.24□□□□□ -0.29
PER3P56645 DNM1P30-201ENST00000563586 452 ntBASIC13.24□□□□□ -0.29
PER3P56645 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.24□□□□□ -0.29
PER3P56645 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
PER3P56645 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.24□□□□□ -0.29
PER3P56645 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC13.24□□□□□ -0.29
PER3P56645 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC13.24□□□□□ -0.29
PER3P56645 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.24□□□□□ -0.29
PER3P56645 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
PER3P56645 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
PER3P56645 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.24□□□□□ -0.29
PER3P56645 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
PER3P56645 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
PER3P56645 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
PER3P56645 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.23□□□□□ -0.29
PER3P56645 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PER3P56645 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.23□□□□□ -0.29
PER3P56645 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.23□□□□□ -0.29
PER3P56645 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.23□□□□□ -0.29
PER3P56645 AL138725.1-201ENST00000407347 1314 ntBASIC13.23□□□□□ -0.29
PER3P56645 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PER3P56645 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.23□□□□□ -0.29
PER3P56645 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.23□□□□□ -0.29
PER3P56645 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.23□□□□□ -0.29
PER3P56645 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.23□□□□□ -0.29
PER3P56645 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.23□□□□□ -0.29
PER3P56645 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 RN7SL67P-201ENST00000492147 296 ntBASIC13.23□□□□□ -0.29
PER3P56645 HLA-J-204ENST00000495278 958 ntBASIC13.23□□□□□ -0.29
PER3P56645 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
PER3P56645 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.23□□□□□ -0.29
PER3P56645 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.23□□□□□ -0.29
PER3P56645 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.23□□□□□ -0.29
PER3P56645 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.23□□□□□ -0.29
PER3P56645 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.23□□□□□ -0.29
PER3P56645 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.23□□□□□ -0.29
PER3P56645 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.23□□□□□ -0.29
PER3P56645 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
PER3P56645 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
PER3P56645 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
PER3P56645 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
PER3P56645 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms