Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 AC131097.4-201ENST00000442867 571 ntTSL 4 BASIC6.06□□□□□ -1.44
USH2AO75445 AC015818.1-201ENST00000451011 244 ntBASIC6.06□□□□□ -1.44
USH2AO75445 GAPDHP76-201ENST00000512278 976 ntBASIC6.06□□□□□ -1.44
USH2AO75445 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC6.06□□□□□ -1.44
USH2AO75445 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC6.06□□□□□ -1.44
USH2AO75445 ETV7-208ENST00000627426 1285 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 FAM90A22P-201ENST00000400142 1395 ntBASIC6.06□□□□□ -1.44
USH2AO75445 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
USH2AO75445 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 OR7E122P-201ENST00000383606 1017 ntBASIC6.06□□□□□ -1.44
USH2AO75445 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC6.06□□□□□ -1.44
USH2AO75445 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC6.06□□□□□ -1.44
USH2AO75445 AC073578.1-201ENST00000535133 493 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC6.06□□□□□ -1.44
USH2AO75445 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
USH2AO75445 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USH2AO75445 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC6.06□□□□□ -1.44
USH2AO75445 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
USH2AO75445 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
USH2AO75445 AP000437.1-201ENST00000624057 2085 ntBASIC6.05□□□□□ -1.44
USH2AO75445 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC6.05□□□□□ -1.44
USH2AO75445 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC6.05□□□□□ -1.44
USH2AO75445 LCK-206ENST00000373564 2137 ntTSL 5 BASIC6.05□□□□□ -1.44
USH2AO75445 MED20-204ENST00000409312 932 ntTSL 2 BASIC6.05□□□□□ -1.44
USH2AO75445 SDCBP2P1-201ENST00000416115 614 ntBASIC6.05□□□□□ -1.44
USH2AO75445 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC6.05□□□□□ -1.44
USH2AO75445 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 SNORA74.2-201ENST00000516496 180 ntBASIC6.05□□□□□ -1.44
USH2AO75445 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC6.05□□□□□ -1.44
USH2AO75445 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC6.05□□□□□ -1.44
USH2AO75445 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC6.05□□□□□ -1.44
USH2AO75445 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC6.05□□□□□ -1.44
USH2AO75445 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 ACE3P-201ENST00000423435 1973 ntBASIC6.05□□□□□ -1.44
USH2AO75445 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
USH2AO75445 MYADML-201ENST00000474610 2147 ntBASIC6.05□□□□□ -1.44
USH2AO75445 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC6.05□□□□□ -1.44
USH2AO75445 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
USH2AO75445 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC6.05□□□□□ -1.44
USH2AO75445 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC6.05□□□□□ -1.44
USH2AO75445 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC6.05□□□□□ -1.44
USH2AO75445 PRKN-210ENST00000612540 603 ntTSL 5 BASIC6.05□□□□□ -1.44
USH2AO75445 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
USH2AO75445 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USH2AO75445 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC6.05□□□□□ -1.44
USH2AO75445 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC6.05□□□□□ -1.44
USH2AO75445 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
USH2AO75445 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms