RNA–Protein interactions for RNA: ENST00000450929.5

TGFA-207, Transcript of transforming growth factor alpha, humanhuman

TSL 1 (best) BASIC

Gene TGFA, Length 950 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-207ENST00000450929 NISCHQ9Y2I1 1504 aa30.57■■■□□ 2.49
TGFA-207ENST00000450929 CCDC180Q9P1Z9 1646 aa27.12■■□□□ 1.93
TGFA-207ENST00000450929 ABCC9O60706 1549 aa26.81■■□□□ 1.88
TGFA-207ENST00000450929 DCAF8L2P0C7V8 631 aa25.7■■□□□ 1.7
TGFA-207ENST00000450929 RB1CC1Q8TDY2 1594 aa25.68■■□□□ 1.7
TGFA-207ENST00000450929 NACADO15069 1562 aa25.63■■□□□ 1.69
TGFA-207ENST00000450929 MYO15BQ96JP2 1530 aa25.45■■□□□ 1.66
TGFA-207ENST00000450929 ZCCHC6Q5VYS8 1495 aaKnown RBP25.42■■□□□ 1.66
TGFA-207ENST00000450929 DCAF1Q9Y4B6 1507 aa25.28■■□□□ 1.64
TGFA-207ENST00000450929 PABPN1Q86U42 306 aaKnown RBP eCLIP25.11■■□□□ 1.61
TGFA-207ENST00000450929 UNC13AQ9UPW8 1703 aa24.94■■□□□ 1.58
TGFA-207ENST00000450929 BICRAQ9NZM4 1560 aa24.9■■□□□ 1.58
TGFA-207ENST00000450929 DNAJC5BQ9UF47 199 aa24.84■■□□□ 1.57
TGFA-207ENST00000450929 SCRIBQ14160 1630 aa24.78■■□□□ 1.56
TGFA-207ENST00000450929 SHROOM4Q9ULL8 1493 aa24.66■■□□□ 1.54
TGFA-207ENST00000450929 EIF4G1Q04637 1599 aaKnown RBP24.26■■□□□ 1.47
TGFA-207ENST00000450929 CC2D2AQ9P2K1 1620 aa24.19■■□□□ 1.46
TGFA-207ENST00000450929 CECR2Q9BXF3 1484 aa24.13■■□□□ 1.45
TGFA-207ENST00000450929 NCAPD3P42695 1498 aa23.71■■□□□ 1.39
TGFA-207ENST00000450929 ATAD2BQ9ULI0 1458 aa23.69■■□□□ 1.38
TGFA-207ENST00000450929 SMARCA4P51532 1647 aa23.69■■□□□ 1.38
TGFA-207ENST00000450929 BAZ1AQ9NRL2 1556 aaPredicted RBP23.68■■□□□ 1.38
TGFA-207ENST00000450929 SMARCA2P51531 1590 aa23.61■■□□□ 1.37
TGFA-207ENST00000450929 MROH2BQ7Z745 1585 aa23.56■■□□□ 1.36
TGFA-207ENST00000450929 HMGXB3Q12766 1538 aa23.51■■□□□ 1.35
TGFA-207ENST00000450929 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
TGFA-207ENST00000450929 BAZ1BQ9UIG0 1483 aaKnown RBP23.46■■□□□ 1.35
TGFA-207ENST00000450929 RSF1Q96T23 1441 aaPredicted RBP23.28■■□□□ 1.32
TGFA-207ENST00000450929 WIZO95785 1651 aa23.22■■□□□ 1.31
TGFA-207ENST00000450929 NESP48681 1621 aa23.15■■□□□ 1.3
TGFA-207ENST00000450929 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
TGFA-207ENST00000450929 CADPSQ9ULU8 1353 aa23.03■■□□□ 1.28
TGFA-207ENST00000450929 LAMC3Q9Y6N6 1575 aa23.03■■□□□ 1.28
TGFA-207ENST00000450929 TOP2AP11388 1531 aaKnown RBP23.01■■□□□ 1.27
TGFA-207ENST00000450929 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
TGFA-207ENST00000450929 CUX2O14529 1486 aa22.93■■□□□ 1.26
TGFA-207ENST00000450929 CFTRP13569 1480 aa22.84■■□□□ 1.25
TGFA-207ENST00000450929 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
TGFA-207ENST00000450929 THOC2Q8NI27 1593 aaKnown RBP22.76■■□□□ 1.23
TGFA-207ENST00000450929 KIF21AQ7Z4S6 1674 aa22.74■■□□□ 1.23
TGFA-207ENST00000450929 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
TGFA-207ENST00000450929 MRC2Q9UBG0 1479 aa22.7■■□□□ 1.22
TGFA-207ENST00000450929 CEP164Q9UPV0 1460 aa22.69■■□□□ 1.22
TGFA-207ENST00000450929 SUPT5HO00267 1087 aaKnown RBP22.61■■□□□ 1.21
TGFA-207ENST00000450929 WDR62O43379 1518 aa22.59■■□□□ 1.21
TGFA-207ENST00000450929 URB2Q14146 1524 aaKnown RBP22.5■■□□□ 1.19
TGFA-207ENST00000450929 DNAJC5Q9H3Z4 198 aa22.49■■□□□ 1.19
TGFA-207ENST00000450929 PRDM2Q13029 1718 aa22.42■■□□□ 1.18
TGFA-207ENST00000450929 ABCC8Q09428 1581 aa22.33■■□□□ 1.17
TGFA-207ENST00000450929 TOPBP1Q92547 1522 aa22.33■■□□□ 1.17
TGFA-207ENST00000450929 DNMBPQ6XZF7 1577 aa22.25■■□□□ 1.15
TGFA-207ENST00000450929 IFT140Q96RY7 1462 aa22.25■■□□□ 1.15
TGFA-207ENST00000450929 ZNF608Q9ULD9 1512 aaPredicted RBP22.16■■□□□ 1.14
TGFA-207ENST00000450929 POLA1P09884 1462 aaPredicted RBP22.14■■□□□ 1.13
TGFA-207ENST00000450929 CUX1P39880 1505 aa22.1■■□□□ 1.13
TGFA-207ENST00000450929 SOGA1O94964 1423 aa22.08■■□□□ 1.13
TGFA-207ENST00000450929 RAD54L2Q9Y4B4 1467 aa22.06■■□□□ 1.12
TGFA-207ENST00000450929 FGD5Q6ZNL6 1462 aa22.05■■□□□ 1.12
TGFA-207ENST00000450929 TARBP1Q13395 1621 aaKnown RBP22.05■■□□□ 1.12
TGFA-207ENST00000450929 AQRO60306 1485 aaKnown RBP eCLIP22.04■■□□□ 1.12
TGFA-207ENST00000450929 OSCARQ8IYS5 282 aa22.04■■□□□ 1.12
TGFA-207ENST00000450929 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
TGFA-207ENST00000450929 EIF4G3O43432 1585 aaKnown RBP21.97■■□□□ 1.11
TGFA-207ENST00000450929 WRNQ14191 1432 aaPredicted RBP eCLIP21.94■■□□□ 1.1
TGFA-207ENST00000450929 WDR97A6NE52 1622 aa21.86■■□□□ 1.09
TGFA-207ENST00000450929 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
TGFA-207ENST00000450929 FBLN2P98095 1184 aa21.84■■□□□ 1.09
TGFA-207ENST00000450929 TOP2BQ02880 1626 aa21.84■■□□□ 1.09
TGFA-207ENST00000450929 GRIN2BQ13224 1484 aa21.82■■□□□ 1.08
TGFA-207ENST00000450929 SYNJ1O43426 1573 aa21.82■■□□□ 1.08
TGFA-207ENST00000450929 GAPVD1Q14C86 1478 aa21.8■■□□□ 1.08
TGFA-207ENST00000450929 SNAPC4Q5SXM2 1469 aa21.79■■□□□ 1.08
TGFA-207ENST00000450929 BIVM-ERCC5R4GMW8 1640 aa21.79■■□□□ 1.08
TGFA-207ENST00000450929 CHMP7Q8WUX9 453 aaPredicted RBP21.76■■□□□ 1.07
TGFA-207ENST00000450929 MAGI1Q96QZ7 1491 aaPredicted RBP21.76■■□□□ 1.07
TGFA-207ENST00000450929 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
TGFA-207ENST00000450929 SYNJ2O15056 1496 aa21.69■■□□□ 1.06
TGFA-207ENST00000450929 TRIM41Q8WV44 630 aa21.67■■□□□ 1.06
TGFA-207ENST00000450929 CHD1O14646 1710 aa21.66■■□□□ 1.06
TGFA-207ENST00000450929 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
TGFA-207ENST00000450929 ARHGEF11O15085 1522 aa21.59■■□□□ 1.05
TGFA-207ENST00000450929 FHAD1B1AJZ9 1412 aa21.56■■□□□ 1.04
TGFA-207ENST00000450929 ERICH3Q5RHP9 1530 aa21.56■■□□□ 1.04
TGFA-207ENST00000450929 RIMBP3CA6NJZ7 1639 aa21.55■■□□□ 1.04
TGFA-207ENST00000450929 RIMBP3BA6NNM3 1639 aa21.55■■□□□ 1.04
TGFA-207ENST00000450929 RIMBP3Q9UFD9 1639 aa21.55■■□□□ 1.04
TGFA-207ENST00000450929 CLASP1Q7Z460 1538 aa21.53■■□□□ 1.04
TGFA-207ENST00000450929 GRIN2AQ12879 1464 aa21.52■■□□□ 1.04
TGFA-207ENST00000450929 ADAMTS12P58397 1594 aa21.51■■□□□ 1.03
TGFA-207ENST00000450929 KIF27Q86VH2 1401 aa21.5■■□□□ 1.03
TGFA-207ENST00000450929 CYB5RLQ6IPT4 315 aa21.49■■□□□ 1.03
TGFA-207ENST00000450929 IGF1RP08069 1367 aa21.48■■□□□ 1.03
TGFA-207ENST00000450929 NUP160Q12769 1436 aa21.46■■□□□ 1.03
TGFA-207ENST00000450929 ARAP1Q96P48 1450 aa21.41■■□□□ 1.02
TGFA-207ENST00000450929 CEP170Q5SW79 1584 aa21.38■■□□□ 1.01
TGFA-207ENST00000450929 CARMIL1Q5VZK9 1371 aa21.33■■□□□ 1
TGFA-207ENST00000450929 JPH4Q96JJ6 628 aa21.3■■□□□ 1
TGFA-207ENST00000450929 CUL7Q14999 1698 aa21.26■□□□□ 0.99
TGFA-207ENST00000450929 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
TGFA-207ENST00000450929 PRG4Q92954 1404 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms