RNA–Protein interactions for RNA: ENST00000544904.3

RCBTB2-206, Transcript of RCC1 and BTB domain containing protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCBTB2, Length 2,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB2-206ENST00000544904 NISCHQ9Y2I1 1504 aa28.44■■■□□ 2.14
RCBTB2-206ENST00000544904 DCAF8L2P0C7V8 631 aa24.68■■□□□ 1.54
RCBTB2-206ENST00000544904 CCDC180Q9P1Z9 1646 aa24.4■■□□□ 1.5
RCBTB2-206ENST00000544904 ABCC9O60706 1549 aa24.22■■□□□ 1.47
RCBTB2-206ENST00000544904 SHROOM4Q9ULL8 1493 aa24.07■■□□□ 1.44
RCBTB2-206ENST00000544904 ZCCHC6Q5VYS8 1495 aaKnown RBP23.77■■□□□ 1.39
RCBTB2-206ENST00000544904 SCRIBQ14160 1630 aa23.17■■□□□ 1.3
RCBTB2-206ENST00000544904 PABPN1Q86U42 306 aaKnown RBP eCLIP23.12■■□□□ 1.29
RCBTB2-206ENST00000544904 SUPT5HO00267 1087 aaKnown RBP23.07■■□□□ 1.28
RCBTB2-206ENST00000544904 DCAF1Q9Y4B6 1507 aa23.04■■□□□ 1.28
RCBTB2-206ENST00000544904 NACADO15069 1562 aa22.96■■□□□ 1.27
RCBTB2-206ENST00000544904 RB1CC1Q8TDY2 1594 aa22.92■■□□□ 1.26
RCBTB2-206ENST00000544904 MYO15BQ96JP2 1530 aa22.73■■□□□ 1.23
RCBTB2-206ENST00000544904 CECR2Q9BXF3 1484 aa22.5■■□□□ 1.19
RCBTB2-206ENST00000544904 UNC13AQ9UPW8 1703 aa22.49■■□□□ 1.19
RCBTB2-206ENST00000544904 BICRAQ9NZM4 1560 aa22.36■■□□□ 1.17
RCBTB2-206ENST00000544904 MROH2BQ7Z745 1585 aa22.19■■□□□ 1.14
RCBTB2-206ENST00000544904 RSF1Q96T23 1441 aaPredicted RBP22.19■■□□□ 1.14
RCBTB2-206ENST00000544904 WIZO95785 1651 aa21.99■■□□□ 1.11
RCBTB2-206ENST00000544904 BAZ1AQ9NRL2 1556 aaPredicted RBP21.88■■□□□ 1.09
RCBTB2-206ENST00000544904 SMARCA4P51532 1647 aa21.86■■□□□ 1.09
RCBTB2-206ENST00000544904 DNAJC5BQ9UF47 199 aa21.85■■□□□ 1.09
RCBTB2-206ENST00000544904 EIF4G1Q04637 1599 aaKnown RBP21.76■■□□□ 1.07
RCBTB2-206ENST00000544904 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
RCBTB2-206ENST00000544904 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
RCBTB2-206ENST00000544904 BAZ1BQ9UIG0 1483 aaKnown RBP21.59■■□□□ 1.05
RCBTB2-206ENST00000544904 EHMT2Q96KQ7 1210 aa21.58■■□□□ 1.04
RCBTB2-206ENST00000544904 CC2D2AQ9P2K1 1620 aa21.55■■□□□ 1.04
RCBTB2-206ENST00000544904 CCDC88BA6NC98 1476 aa21.53■■□□□ 1.04
RCBTB2-206ENST00000544904 LOC105371045A0A1W2PR82 267 aa21.47■■□□□ 1.03
RCBTB2-206ENST00000544904 FAM9AQ8IZU1 332 aaPredicted RBP21.47■■□□□ 1.03
RCBTB2-206ENST00000544904 TOP2AP11388 1531 aaKnown RBP21.46■■□□□ 1.03
RCBTB2-206ENST00000544904 SMARCA2P51531 1590 aa21.42■■□□□ 1.02
RCBTB2-206ENST00000544904 TRIM41Q8WV44 630 aa21.37■■□□□ 1.01
RCBTB2-206ENST00000544904 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
RCBTB2-206ENST00000544904 PCGF6Q9BYE7 350 aa21.31■■□□□ 1
RCBTB2-206ENST00000544904 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
RCBTB2-206ENST00000544904 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
RCBTB2-206ENST00000544904 NESP48681 1621 aa21.19■□□□□ 0.98
RCBTB2-206ENST00000544904 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
RCBTB2-206ENST00000544904 CADPSQ9ULU8 1353 aa21■□□□□ 0.95
RCBTB2-206ENST00000544904 PPARGC1BQ86YN6 1023 aaKnown RBP20.98■□□□□ 0.95
RCBTB2-206ENST00000544904 WRNQ14191 1432 aaPredicted RBP eCLIP20.9■□□□□ 0.94
RCBTB2-206ENST00000544904 CFTRP13569 1480 aa20.9■□□□□ 0.94
RCBTB2-206ENST00000544904 RANGAP1P46060 587 aaPredicted RBP20.87■□□□□ 0.93
RCBTB2-206ENST00000544904 HRCP23327 699 aa20.85■□□□□ 0.93
RCBTB2-206ENST00000544904 SOGA1O94964 1423 aa20.84■□□□□ 0.93
RCBTB2-206ENST00000544904 RUSC2Q8N2Y8 1516 aa20.83■□□□□ 0.92
RCBTB2-206ENST00000544904 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
RCBTB2-206ENST00000544904 SYNJ1O43426 1573 aa20.8■□□□□ 0.92
RCBTB2-206ENST00000544904 CUX1P39880 1505 aa20.69■□□□□ 0.9
RCBTB2-206ENST00000544904 ERCC6Q03468 1493 aa20.67■□□□□ 0.9
RCBTB2-206ENST00000544904 TTBK1Q5TCY1 1321 aaPredicted RBP20.67■□□□□ 0.9
RCBTB2-206ENST00000544904 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
RCBTB2-206ENST00000544904 CEP164Q9UPV0 1460 aa20.62■□□□□ 0.89
RCBTB2-206ENST00000544904 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
RCBTB2-206ENST00000544904 UBTFP17480 764 aaKnown RBP20.61■□□□□ 0.89
RCBTB2-206ENST00000544904 CSRNP3Q8WYN3 585 aa20.58■□□□□ 0.89
RCBTB2-206ENST00000544904 KIF21AQ7Z4S6 1674 aa20.57■□□□□ 0.88
RCBTB2-206ENST00000544904 URB2Q14146 1524 aaKnown RBP20.56■□□□□ 0.88
RCBTB2-206ENST00000544904 TDRD9Q8NDG6 1382 aaKnown RBP20.55■□□□□ 0.88
RCBTB2-206ENST00000544904 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
RCBTB2-206ENST00000544904 FGD5Q6ZNL6 1462 aa20.55■□□□□ 0.88
RCBTB2-206ENST00000544904 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
RCBTB2-206ENST00000544904 TOPBP1Q92547 1522 aa20.5■□□□□ 0.87
RCBTB2-206ENST00000544904 CUX2O14529 1486 aa20.48■□□□□ 0.87
RCBTB2-206ENST00000544904 TOP2BQ02880 1626 aa20.48■□□□□ 0.87
RCBTB2-206ENST00000544904 POLA1P09884 1462 aaPredicted RBP20.44■□□□□ 0.86
RCBTB2-206ENST00000544904 FBLN2P98095 1184 aa20.4■□□□□ 0.86
RCBTB2-206ENST00000544904 AQRO60306 1485 aaKnown RBP eCLIP20.38■□□□□ 0.85
RCBTB2-206ENST00000544904 PRDM2Q13029 1718 aa20.34■□□□□ 0.85
RCBTB2-206ENST00000544904 MRC2Q9UBG0 1479 aa20.34■□□□□ 0.85
RCBTB2-206ENST00000544904 DNMBPQ6XZF7 1577 aa20.34■□□□□ 0.85
RCBTB2-206ENST00000544904 BIVM-ERCC5R4GMW8 1640 aa20.33■□□□□ 0.85
RCBTB2-206ENST00000544904 KIF27Q86VH2 1401 aa20.32■□□□□ 0.84
RCBTB2-206ENST00000544904 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
RCBTB2-206ENST00000544904 RAPGEF2Q9Y4G8 1499 aa20.32■□□□□ 0.84
RCBTB2-206ENST00000544904 P3H3Q8IVL6 736 aa20.31■□□□□ 0.84
RCBTB2-206ENST00000544904 IGF1RP08069 1367 aa20.27■□□□□ 0.84
RCBTB2-206ENST00000544904 CARMIL1Q5VZK9 1371 aa20.19■□□□□ 0.82
RCBTB2-206ENST00000544904 GAPVD1Q14C86 1478 aa20.15■□□□□ 0.82
RCBTB2-206ENST00000544904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.15■□□□□ 0.82
RCBTB2-206ENST00000544904 ATP1B4Q9UN42 357 aaPredicted RBP20.13■□□□□ 0.81
RCBTB2-206ENST00000544904 ABCA10Q8WWZ4 1543 aa20.13■□□□□ 0.81
RCBTB2-206ENST00000544904 EEA1Q15075 1411 aa20.12■□□□□ 0.81
RCBTB2-206ENST00000544904 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
RCBTB2-206ENST00000544904 GOLGA3Q08378 1498 aa20.12■□□□□ 0.81
RCBTB2-206ENST00000544904 WDR62O43379 1518 aa20.11■□□□□ 0.81
RCBTB2-206ENST00000544904 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
RCBTB2-206ENST00000544904 ARID3CA6NKF2 412 aa20.09■□□□□ 0.81
RCBTB2-206ENST00000544904 CHMP7Q8WUX9 453 aaPredicted RBP20.07■□□□□ 0.8
RCBTB2-206ENST00000544904 TARBP1Q13395 1621 aaKnown RBP20.05■□□□□ 0.8
RCBTB2-206ENST00000544904 PRXQ9BXM0 1461 aa20.05■□□□□ 0.8
RCBTB2-206ENST00000544904 TNIKQ9UKE5 1360 aa20.01■□□□□ 0.79
RCBTB2-206ENST00000544904 IFT140Q96RY7 1462 aa20.01■□□□□ 0.79
RCBTB2-206ENST00000544904 SNAPC4Q5SXM2 1469 aa19.98■□□□□ 0.79
RCBTB2-206ENST00000544904 CLIP1P30622 1438 aa19.98■□□□□ 0.79
RCBTB2-206ENST00000544904 CCER1Q8TC90 406 aaPredicted RBP19.95■□□□□ 0.78
RCBTB2-206ENST00000544904 EIF4G3O43432 1585 aaKnown RBP19.93■□□□□ 0.78
RCBTB2-206ENST00000544904 GRIN2BQ13224 1484 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms