RNA–Protein interactions for RNA: ENST00000409758.1

AP001341.1-201, humanhuman

TSL 3 BASIC

Gene AP001341.1, Length 763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001341.1-201ENST00000409758 NISCHQ9Y2I1 1504 aa29.88■■■□□ 2.37
AP001341.1-201ENST00000409758 ABCC9O60706 1549 aa26.88■■□□□ 1.89
AP001341.1-201ENST00000409758 CCDC180Q9P1Z9 1646 aa26.68■■□□□ 1.86
AP001341.1-201ENST00000409758 DCAF8L2P0C7V8 631 aa25.54■■□□□ 1.68
AP001341.1-201ENST00000409758 RB1CC1Q8TDY2 1594 aa25.52■■□□□ 1.68
AP001341.1-201ENST00000409758 NACADO15069 1562 aa25.33■■□□□ 1.65
AP001341.1-201ENST00000409758 DNAJC5BQ9UF47 199 aa25.19■■□□□ 1.62
AP001341.1-201ENST00000409758 PABPN1Q86U42 306 aaKnown RBP eCLIP25.13■■□□□ 1.61
AP001341.1-201ENST00000409758 MYO15BQ96JP2 1530 aa24.94■■□□□ 1.58
AP001341.1-201ENST00000409758 ZCCHC6Q5VYS8 1495 aaKnown RBP24.74■■□□□ 1.55
AP001341.1-201ENST00000409758 UNC13AQ9UPW8 1703 aa24.68■■□□□ 1.54
AP001341.1-201ENST00000409758 BICRAQ9NZM4 1560 aa24.67■■□□□ 1.54
AP001341.1-201ENST00000409758 DCAF1Q9Y4B6 1507 aa24.64■■□□□ 1.53
AP001341.1-201ENST00000409758 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
AP001341.1-201ENST00000409758 SHROOM4Q9ULL8 1493 aa24.41■■□□□ 1.5
AP001341.1-201ENST00000409758 CECR2Q9BXF3 1484 aa24.21■■□□□ 1.47
AP001341.1-201ENST00000409758 CC2D2AQ9P2K1 1620 aa24.17■■□□□ 1.46
AP001341.1-201ENST00000409758 EIF4G1Q04637 1599 aaKnown RBP24.13■■□□□ 1.45
AP001341.1-201ENST00000409758 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
AP001341.1-201ENST00000409758 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
AP001341.1-201ENST00000409758 SMARCA2P51531 1590 aa23.28■■□□□ 1.32
AP001341.1-201ENST00000409758 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
AP001341.1-201ENST00000409758 SMARCA4P51532 1647 aa23.26■■□□□ 1.31
AP001341.1-201ENST00000409758 BAZ1AQ9NRL2 1556 aaPredicted RBP23.21■■□□□ 1.31
AP001341.1-201ENST00000409758 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
AP001341.1-201ENST00000409758 DNAJC5Q9H3Z4 198 aa23.18■■□□□ 1.3
AP001341.1-201ENST00000409758 BAZ1BQ9UIG0 1483 aaKnown RBP23.17■■□□□ 1.3
AP001341.1-201ENST00000409758 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
AP001341.1-201ENST00000409758 CUX2O14529 1486 aa23.11■■□□□ 1.29
AP001341.1-201ENST00000409758 NESP48681 1621 aa23.04■■□□□ 1.28
AP001341.1-201ENST00000409758 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
AP001341.1-201ENST00000409758 PEG3Q9GZU2 1588 aa23■■□□□ 1.27
AP001341.1-201ENST00000409758 LAMC3Q9Y6N6 1575 aa22.84■■□□□ 1.25
AP001341.1-201ENST00000409758 PDS5BQ9NTI5 1447 aa22.84■■□□□ 1.25
AP001341.1-201ENST00000409758 CADPSQ9ULU8 1353 aa22.77■■□□□ 1.24
AP001341.1-201ENST00000409758 WIZO95785 1651 aa22.69■■□□□ 1.22
AP001341.1-201ENST00000409758 THOC2Q8NI27 1593 aaKnown RBP22.68■■□□□ 1.22
AP001341.1-201ENST00000409758 KIF21AQ7Z4S6 1674 aa22.61■■□□□ 1.21
AP001341.1-201ENST00000409758 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
AP001341.1-201ENST00000409758 MRC2Q9UBG0 1479 aa22.59■■□□□ 1.21
AP001341.1-201ENST00000409758 CEP164Q9UPV0 1460 aa22.51■■□□□ 1.19
AP001341.1-201ENST00000409758 FANCD2Q9BXW9 1451 aa22.49■■□□□ 1.19
AP001341.1-201ENST00000409758 CFTRP13569 1480 aa22.46■■□□□ 1.19
AP001341.1-201ENST00000409758 TOP2AP11388 1531 aaKnown RBP22.46■■□□□ 1.19
AP001341.1-201ENST00000409758 WDR62O43379 1518 aa22.45■■□□□ 1.18
AP001341.1-201ENST00000409758 TRIM41Q8WV44 630 aa22.28■■□□□ 1.16
AP001341.1-201ENST00000409758 CCDC88BA6NC98 1476 aa22.26■■□□□ 1.15
AP001341.1-201ENST00000409758 URB2Q14146 1524 aaKnown RBP22.25■■□□□ 1.15
AP001341.1-201ENST00000409758 OSCARQ8IYS5 282 aa22.22■■□□□ 1.15
AP001341.1-201ENST00000409758 IFT140Q96RY7 1462 aa22.07■■□□□ 1.12
AP001341.1-201ENST00000409758 ABCC8Q09428 1581 aa22.03■■□□□ 1.12
AP001341.1-201ENST00000409758 TOPBP1Q92547 1522 aa22.02■■□□□ 1.12
AP001341.1-201ENST00000409758 ZNF608Q9ULD9 1512 aaPredicted RBP21.99■■□□□ 1.11
AP001341.1-201ENST00000409758 PRDM2Q13029 1718 aa21.98■■□□□ 1.11
AP001341.1-201ENST00000409758 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
AP001341.1-201ENST00000409758 FBLN2P98095 1184 aa21.88■■□□□ 1.09
AP001341.1-201ENST00000409758 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.09
AP001341.1-201ENST00000409758 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
AP001341.1-201ENST00000409758 EIF4G3O43432 1585 aaKnown RBP21.8■■□□□ 1.08
AP001341.1-201ENST00000409758 POLA1P09884 1462 aaPredicted RBP21.8■■□□□ 1.08
AP001341.1-201ENST00000409758 SOGA1O94964 1423 aa21.8■■□□□ 1.08
AP001341.1-201ENST00000409758 TDRD9Q8NDG6 1382 aaKnown RBP21.77■■□□□ 1.08
AP001341.1-201ENST00000409758 CHIC1Q5VXU3 224 aa21.77■■□□□ 1.08
AP001341.1-201ENST00000409758 RAD54L2Q9Y4B4 1467 aa21.76■■□□□ 1.07
AP001341.1-201ENST00000409758 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
AP001341.1-201ENST00000409758 CYB5RLQ6IPT4 315 aa21.72■■□□□ 1.07
AP001341.1-201ENST00000409758 RIMBP3CA6NJZ7 1639 aa21.7■■□□□ 1.06
AP001341.1-201ENST00000409758 RIMBP3BA6NNM3 1639 aa21.7■■□□□ 1.06
AP001341.1-201ENST00000409758 RIMBP3Q9UFD9 1639 aa21.7■■□□□ 1.06
AP001341.1-201ENST00000409758 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
AP001341.1-201ENST00000409758 FGD5Q6ZNL6 1462 aa21.69■■□□□ 1.06
AP001341.1-201ENST00000409758 CHMP7Q8WUX9 453 aaPredicted RBP21.68■■□□□ 1.06
AP001341.1-201ENST00000409758 CUX1P39880 1505 aa21.62■■□□□ 1.05
AP001341.1-201ENST00000409758 SNAPC4Q5SXM2 1469 aa21.59■■□□□ 1.05
AP001341.1-201ENST00000409758 CHD1O14646 1710 aa21.57■■□□□ 1.04
AP001341.1-201ENST00000409758 GRIN2BQ13224 1484 aa21.57■■□□□ 1.04
AP001341.1-201ENST00000409758 TRHP20396 242 aaPredicted RBP21.54■■□□□ 1.04
AP001341.1-201ENST00000409758 MAGI1Q96QZ7 1491 aaPredicted RBP21.53■■□□□ 1.04
AP001341.1-201ENST00000409758 WDR97A6NE52 1622 aa21.53■■□□□ 1.04
AP001341.1-201ENST00000409758 GAPVD1Q14C86 1478 aa21.49■■□□□ 1.03
AP001341.1-201ENST00000409758 ARAP1Q96P48 1450 aa21.48■■□□□ 1.03
AP001341.1-201ENST00000409758 SYNJ2O15056 1496 aa21.47■■□□□ 1.03
AP001341.1-201ENST00000409758 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.02
AP001341.1-201ENST00000409758 SYNJ1O43426 1573 aa21.44■■□□□ 1.02
AP001341.1-201ENST00000409758 ABCA10Q8WWZ4 1543 aa21.42■■□□□ 1.02
AP001341.1-201ENST00000409758 CLASP1Q7Z460 1538 aa21.39■■□□□ 1.01
AP001341.1-201ENST00000409758 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
AP001341.1-201ENST00000409758 PBRM1Q86U86 1689 aa21.29■■□□□ 1
AP001341.1-201ENST00000409758 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
AP001341.1-201ENST00000409758 TOP2BQ02880 1626 aa21.26■□□□□ 0.99
AP001341.1-201ENST00000409758 FHAD1B1AJZ9 1412 aa21.23■□□□□ 0.99
AP001341.1-201ENST00000409758 BIVM-ERCC5R4GMW8 1640 aa21.19■□□□□ 0.98
AP001341.1-201ENST00000409758 ADAMTS12P58397 1594 aa21.17■□□□□ 0.98
AP001341.1-201ENST00000409758 NUP160Q12769 1436 aa21.16■□□□□ 0.98
AP001341.1-201ENST00000409758 ERICH3Q5RHP9 1530 aa21.14■□□□□ 0.98
AP001341.1-201ENST00000409758 CEP170Q5SW79 1584 aa21.11■□□□□ 0.97
AP001341.1-201ENST00000409758 JPH4Q96JJ6 628 aa21.09■□□□□ 0.97
AP001341.1-201ENST00000409758 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
AP001341.1-201ENST00000409758 PRG4Q92954 1404 aaPredicted RBP21.05■□□□□ 0.96
AP001341.1-201ENST00000409758 KIF27Q86VH2 1401 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms