Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARHGEF40Q8TER5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARHGEF40Q8TER5 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ARHGEF40Q8TER5 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 AC092284.1-201ENST00000511386 1289 ntBASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 AC007274.3-201ENST00000619838 385 ntBASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 HTR7P1-202ENST00000624664 4411 ntBASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 MRPS16P3-201ENST00000415961 374 ntBASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 RN7SL487P-201ENST00000468140 344 ntBASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 ST3GAL1P1-201ENST00000513810 1014 ntBASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 PIGCP1-201ENST00000527583 895 ntBASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 IGHV1OR16-3-201ENST00000568138 205 ntBASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 AC131274.3-201ENST00000578745 1271 ntBASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 BAP1-211ENST00000615113 489 ntBASIC20.07■□□□□ 0.8
ARHGEF40Q8TER5 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 OR7E122P-201ENST00000383606 1017 ntBASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 HNRNPA1P55-201ENST00000505935 955 ntBASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF40Q8TER5 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 RNF7-202ENST00000393000 805 ntTSL 2 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 SERF2-205ENST00000403425 690 ntTSL 2 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 HLA-DQB3-203ENST00000425319 356 ntBASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 RPE-208ENST00000436630 1128 ntTSL 2 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 LINC00700-202ENST00000438372 777 ntTSL 5 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF40Q8TER5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARHGEF40Q8TER5 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARHGEF40Q8TER5 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARHGEF40Q8TER5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ARHGEF40Q8TER5 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ARHGEF40Q8TER5 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC20.04■□□□□ 0.8
ARHGEF40Q8TER5 AL391822.1-201ENST00000452580 562 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms