RNA–Protein interactions for RNA: ENST00000505935.2

HNRNPA1P55-201, Transcript of heterogeneous nuclear ribonucleoprotein A1 pseudogene 55, humanhuman

BASIC

Gene HNRNPA1P55, Length 955 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1P55-201ENST00000505935 NISCHQ9Y2I1 1504 aa31.26■■■□□ 2.59
HNRNPA1P55-201ENST00000505935 CCDC180Q9P1Z9 1646 aa27.67■■■□□ 2.02
HNRNPA1P55-201ENST00000505935 ABCC9O60706 1549 aa26.83■■□□□ 1.89
HNRNPA1P55-201ENST00000505935 ZCCHC6Q5VYS8 1495 aaKnown RBP26.12■■□□□ 1.77
HNRNPA1P55-201ENST00000505935 DCAF8L2P0C7V8 631 aa25.95■■□□□ 1.74
HNRNPA1P55-201ENST00000505935 NACADO15069 1562 aa25.94■■□□□ 1.74
HNRNPA1P55-201ENST00000505935 RB1CC1Q8TDY2 1594 aa25.9■■□□□ 1.74
HNRNPA1P55-201ENST00000505935 MYO15BQ96JP2 1530 aa25.87■■□□□ 1.73
HNRNPA1P55-201ENST00000505935 DCAF1Q9Y4B6 1507 aa25.87■■□□□ 1.73
HNRNPA1P55-201ENST00000505935 UNC13AQ9UPW8 1703 aa25.36■■□□□ 1.65
HNRNPA1P55-201ENST00000505935 SCRIBQ14160 1630 aa25.3■■□□□ 1.64
HNRNPA1P55-201ENST00000505935 BICRAQ9NZM4 1560 aa25.16■■□□□ 1.62
HNRNPA1P55-201ENST00000505935 PABPN1Q86U42 306 aaKnown RBP eCLIP25.11■■□□□ 1.61
HNRNPA1P55-201ENST00000505935 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
HNRNPA1P55-201ENST00000505935 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
HNRNPA1P55-201ENST00000505935 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
HNRNPA1P55-201ENST00000505935 CECR2Q9BXF3 1484 aa24.36■■□□□ 1.49
HNRNPA1P55-201ENST00000505935 CC2D2AQ9P2K1 1620 aa24.28■■□□□ 1.48
HNRNPA1P55-201ENST00000505935 SMARCA4P51532 1647 aa24.21■■□□□ 1.47
HNRNPA1P55-201ENST00000505935 BAZ1AQ9NRL2 1556 aaPredicted RBP24.2■■□□□ 1.46
HNRNPA1P55-201ENST00000505935 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
HNRNPA1P55-201ENST00000505935 ATAD2BQ9ULI0 1458 aa24■■□□□ 1.43
HNRNPA1P55-201ENST00000505935 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
HNRNPA1P55-201ENST00000505935 SMARCA2P51531 1590 aa23.96■■□□□ 1.43
HNRNPA1P55-201ENST00000505935 NCAPD3P42695 1498 aa23.94■■□□□ 1.42
HNRNPA1P55-201ENST00000505935 RSF1Q96T23 1441 aaPredicted RBP23.93■■□□□ 1.42
HNRNPA1P55-201ENST00000505935 WIZO95785 1651 aa23.88■■□□□ 1.41
HNRNPA1P55-201ENST00000505935 HMGXB3Q12766 1538 aa23.85■■□□□ 1.41
HNRNPA1P55-201ENST00000505935 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
HNRNPA1P55-201ENST00000505935 TOP2AP11388 1531 aaKnown RBP23.63■■□□□ 1.37
HNRNPA1P55-201ENST00000505935 SUPT5HO00267 1087 aaKnown RBP23.49■■□□□ 1.35
HNRNPA1P55-201ENST00000505935 CCDC88BA6NC98 1476 aa23.35■■□□□ 1.33
HNRNPA1P55-201ENST00000505935 NESP48681 1621 aa23.32■■□□□ 1.32
HNRNPA1P55-201ENST00000505935 LAMC3Q9Y6N6 1575 aa23.25■■□□□ 1.31
HNRNPA1P55-201ENST00000505935 CADPSQ9ULU8 1353 aa23.24■■□□□ 1.31
HNRNPA1P55-201ENST00000505935 CFTRP13569 1480 aa23.17■■□□□ 1.3
HNRNPA1P55-201ENST00000505935 PDS5BQ9NTI5 1447 aa23.07■■□□□ 1.28
HNRNPA1P55-201ENST00000505935 ERCC6Q03468 1493 aa23.06■■□□□ 1.28
HNRNPA1P55-201ENST00000505935 KIF21AQ7Z4S6 1674 aa23.04■■□□□ 1.28
HNRNPA1P55-201ENST00000505935 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
HNRNPA1P55-201ENST00000505935 FANCD2Q9BXW9 1451 aa22.99■■□□□ 1.27
HNRNPA1P55-201ENST00000505935 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
HNRNPA1P55-201ENST00000505935 THOC2Q8NI27 1593 aaKnown RBP22.91■■□□□ 1.26
HNRNPA1P55-201ENST00000505935 MRC2Q9UBG0 1479 aa22.85■■□□□ 1.25
HNRNPA1P55-201ENST00000505935 WDR62O43379 1518 aa22.77■■□□□ 1.24
HNRNPA1P55-201ENST00000505935 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.24
HNRNPA1P55-201ENST00000505935 CUX2O14529 1486 aa22.73■■□□□ 1.23
HNRNPA1P55-201ENST00000505935 TOPBP1Q92547 1522 aa22.67■■□□□ 1.22
HNRNPA1P55-201ENST00000505935 DNMBPQ6XZF7 1577 aa22.66■■□□□ 1.22
HNRNPA1P55-201ENST00000505935 ABCC8Q09428 1581 aa22.62■■□□□ 1.21
HNRNPA1P55-201ENST00000505935 CUX1P39880 1505 aa22.61■■□□□ 1.21
HNRNPA1P55-201ENST00000505935 WRNQ14191 1432 aaPredicted RBP eCLIP22.54■■□□□ 1.2
HNRNPA1P55-201ENST00000505935 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
HNRNPA1P55-201ENST00000505935 POLA1P09884 1462 aaPredicted RBP22.5■■□□□ 1.19
HNRNPA1P55-201ENST00000505935 FGD5Q6ZNL6 1462 aa22.48■■□□□ 1.19
HNRNPA1P55-201ENST00000505935 TOP2BQ02880 1626 aa22.47■■□□□ 1.19
HNRNPA1P55-201ENST00000505935 BIVM-ERCC5R4GMW8 1640 aa22.47■■□□□ 1.19
HNRNPA1P55-201ENST00000505935 IFT140Q96RY7 1462 aa22.43■■□□□ 1.18
HNRNPA1P55-201ENST00000505935 TARBP1Q13395 1621 aaKnown RBP22.41■■□□□ 1.18
HNRNPA1P55-201ENST00000505935 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
HNRNPA1P55-201ENST00000505935 SOGA1O94964 1423 aa22.38■■□□□ 1.17
HNRNPA1P55-201ENST00000505935 ZNF608Q9ULD9 1512 aaPredicted RBP22.35■■□□□ 1.17
HNRNPA1P55-201ENST00000505935 WDR97A6NE52 1622 aa22.3■■□□□ 1.16
HNRNPA1P55-201ENST00000505935 EIF4G3O43432 1585 aaKnown RBP22.27■■□□□ 1.16
HNRNPA1P55-201ENST00000505935 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
HNRNPA1P55-201ENST00000505935 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
HNRNPA1P55-201ENST00000505935 AQRO60306 1485 aaKnown RBP eCLIP22.23■■□□□ 1.15
HNRNPA1P55-201ENST00000505935 ABCA5Q8WWZ7 1642 aa22.17■■□□□ 1.14
HNRNPA1P55-201ENST00000505935 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
HNRNPA1P55-201ENST00000505935 GAPVD1Q14C86 1478 aa22.13■■□□□ 1.13
HNRNPA1P55-201ENST00000505935 CHIC1Q5VXU3 224 aa22.1■■□□□ 1.13
HNRNPA1P55-201ENST00000505935 GRIN2BQ13224 1484 aa22.09■■□□□ 1.13
HNRNPA1P55-201ENST00000505935 PBRM1Q86U86 1689 aa22.09■■□□□ 1.13
HNRNPA1P55-201ENST00000505935 SNAPC4Q5SXM2 1469 aa22.04■■□□□ 1.12
HNRNPA1P55-201ENST00000505935 KIF27Q86VH2 1401 aa22.03■■□□□ 1.12
HNRNPA1P55-201ENST00000505935 MAGI1Q96QZ7 1491 aaPredicted RBP22■■□□□ 1.11
HNRNPA1P55-201ENST00000505935 ERICH3Q5RHP9 1530 aa21.99■■□□□ 1.11
HNRNPA1P55-201ENST00000505935 RUSC2Q8N2Y8 1516 aa21.97■■□□□ 1.11
HNRNPA1P55-201ENST00000505935 ADAMTS12P58397 1594 aa21.94■■□□□ 1.1
HNRNPA1P55-201ENST00000505935 CHD1O14646 1710 aa21.93■■□□□ 1.1
HNRNPA1P55-201ENST00000505935 IGF1RP08069 1367 aa21.92■■□□□ 1.1
HNRNPA1P55-201ENST00000505935 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
HNRNPA1P55-201ENST00000505935 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.09
HNRNPA1P55-201ENST00000505935 FBLN2P98095 1184 aa21.86■■□□□ 1.09
HNRNPA1P55-201ENST00000505935 CHMP7Q8WUX9 453 aaPredicted RBP21.85■■□□□ 1.09
HNRNPA1P55-201ENST00000505935 CUL7Q14999 1698 aa21.85■■□□□ 1.09
HNRNPA1P55-201ENST00000505935 GRIN2AQ12879 1464 aa21.82■■□□□ 1.08
HNRNPA1P55-201ENST00000505935 OSCARQ8IYS5 282 aa21.8■■□□□ 1.08
HNRNPA1P55-201ENST00000505935 CARMIL1Q5VZK9 1371 aa21.78■■□□□ 1.08
HNRNPA1P55-201ENST00000505935 EEA1Q15075 1411 aa21.78■■□□□ 1.08
HNRNPA1P55-201ENST00000505935 CEP170Q5SW79 1584 aa21.73■■□□□ 1.07
HNRNPA1P55-201ENST00000505935 FAM9AQ8IZU1 332 aaPredicted RBP21.72■■□□□ 1.07
HNRNPA1P55-201ENST00000505935 NUP160Q12769 1436 aa21.72■■□□□ 1.07
HNRNPA1P55-201ENST00000505935 CSRNP3Q8WYN3 585 aa21.71■■□□□ 1.07
HNRNPA1P55-201ENST00000505935 PRXQ9BXM0 1461 aa21.71■■□□□ 1.07
HNRNPA1P55-201ENST00000505935 CLASP1Q7Z460 1538 aa21.7■■□□□ 1.07
HNRNPA1P55-201ENST00000505935 DNAJC5Q9H3Z4 198 aa21.7■■□□□ 1.06
HNRNPA1P55-201ENST00000505935 RAPGEF2Q9Y4G8 1499 aa21.69■■□□□ 1.06
HNRNPA1P55-201ENST00000505935 KIF21BO75037 1637 aa21.57■■□□□ 1.04
HNRNPA1P55-201ENST00000505935 KIAA0586Q9BVV6 1533 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms