Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CTGFP29279 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
CTGFP29279 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.5■□□□□ 0.07
CTGFP29279 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.5■□□□□ 0.07
CTGFP29279 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CTGFP29279 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.5■□□□□ 0.07
CTGFP29279 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.5■□□□□ 0.07
CTGFP29279 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CTGFP29279 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 TUBB8P4-201ENST00000511806 1324 ntBASIC15.5■□□□□ 0.07
CTGFP29279 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CTGFP29279 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC15.5■□□□□ 0.07
CTGFP29279 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC15.5■□□□□ 0.07
CTGFP29279 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CTGFP29279 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.5■□□□□ 0.07
CTGFP29279 AL591499.1-201ENST00000307155 1153 ntBASIC15.5■□□□□ 0.07
CTGFP29279 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 RBP4-203ENST00000371469 814 ntTSL 5 BASIC15.5■□□□□ 0.07
CTGFP29279 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC15.5■□□□□ 0.07
CTGFP29279 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 RBMXP1-201ENST00000408004 1191 ntBASIC15.5■□□□□ 0.07
CTGFP29279 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC15.5■□□□□ 0.07
CTGFP29279 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC15.5■□□□□ 0.07
CTGFP29279 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC15.5■□□□□ 0.07
CTGFP29279 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC15.5■□□□□ 0.07
CTGFP29279 RFNG-202ENST00000429557 994 ntTSL 5 BASIC15.5■□□□□ 0.07
CTGFP29279 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC15.5■□□□□ 0.07
CTGFP29279 RPSAP16-201ENST00000447583 821 ntBASIC15.5■□□□□ 0.07
CTGFP29279 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC15.5■□□□□ 0.07
CTGFP29279 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC15.5■□□□□ 0.07
CTGFP29279 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC15.5■□□□□ 0.07
CTGFP29279 AL450346.2-201ENST00000495602 1024 ntBASIC15.5■□□□□ 0.07
CTGFP29279 CCNL2P1-201ENST00000512846 969 ntBASIC15.5■□□□□ 0.07
CTGFP29279 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC15.5■□□□□ 0.07
CTGFP29279 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC15.5■□□□□ 0.07
CTGFP29279 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC15.5■□□□□ 0.07
CTGFP29279 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CTGFP29279 METTL7AP1-201ENST00000547343 496 ntBASIC15.5■□□□□ 0.07
CTGFP29279 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC15.5■□□□□ 0.07
CTGFP29279 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC15.5■□□□□ 0.07
CTGFP29279 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
CTGFP29279 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 AC134878.2-201ENST00000620700 1265 ntBASIC15.5■□□□□ 0.07
CTGFP29279 RCC2P1-201ENST00000452257 1476 ntBASIC15.5■□□□□ 0.07
CTGFP29279 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.5■□□□□ 0.07
CTGFP29279 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 AC040160.2-201ENST00000623816 1675 ntBASIC15.5■□□□□ 0.07
CTGFP29279 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CTGFP29279 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.5■□□□□ 0.07
CTGFP29279 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CTGFP29279 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTGFP29279 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTGFP29279 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTGFP29279 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTGFP29279 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTGFP29279 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTGFP29279 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CTGFP29279 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CTGFP29279 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.49■□□□□ 0.07
CTGFP29279 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTGFP29279 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CTGFP29279 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.49■□□□□ 0.07
CTGFP29279 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTGFP29279 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTGFP29279 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTGFP29279 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.49■□□□□ 0.07
CTGFP29279 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CTGFP29279 POP5-201ENST00000341039 913 ntTSL 2 BASIC15.49■□□□□ 0.07
CTGFP29279 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC15.49■□□□□ 0.07
CTGFP29279 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC15.49■□□□□ 0.07
CTGFP29279 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC15.49■□□□□ 0.07
CTGFP29279 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CTGFP29279 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.49■□□□□ 0.07
CTGFP29279 AC005077.3-201ENST00000449614 213 ntBASIC15.49■□□□□ 0.07
CTGFP29279 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC15.49■□□□□ 0.07
CTGFP29279 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC15.49■□□□□ 0.07
CTGFP29279 MST1L-204ENST00000545160 559 ntTSL 4 BASIC15.49■□□□□ 0.07
CTGFP29279 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC15.49■□□□□ 0.07
CTGFP29279 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC15.49■□□□□ 0.07
CTGFP29279 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC15.49■□□□□ 0.07
CTGFP29279 BOLA3P2-201ENST00000586496 323 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms