RNA–Protein interactions for RNA: ENST00000366259.2

LINC00449-201, long intergenic non-protein coding RNA 449, humanhuman

TSL 2 BASIC

Gene LINC00449, Length 872 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00449-201ENST00000366259 NISCHQ9Y2I1 1504 aa31.28■■■□□ 2.6
LINC00449-201ENST00000366259 ABCC9O60706 1549 aa28.28■■■□□ 2.12
LINC00449-201ENST00000366259 CCDC180Q9P1Z9 1646 aa28.08■■■□□ 2.09
LINC00449-201ENST00000366259 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
LINC00449-201ENST00000366259 DNAJC5BQ9UF47 199 aa26.68■■□□□ 1.86
LINC00449-201ENST00000366259 NACADO15069 1562 aa26.57■■□□□ 1.84
LINC00449-201ENST00000366259 DCAF8L2P0C7V8 631 aa26.53■■□□□ 1.84
LINC00449-201ENST00000366259 PABPN1Q86U42 306 aaKnown RBP eCLIP26.34■■□□□ 1.81
LINC00449-201ENST00000366259 UNC13AQ9UPW8 1703 aa26.31■■□□□ 1.8
LINC00449-201ENST00000366259 MYO15BQ96JP2 1530 aa26.12■■□□□ 1.77
LINC00449-201ENST00000366259 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
LINC00449-201ENST00000366259 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
LINC00449-201ENST00000366259 DCAF1Q9Y4B6 1507 aa25.77■■□□□ 1.72
LINC00449-201ENST00000366259 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
LINC00449-201ENST00000366259 SHROOM4Q9ULL8 1493 aa25.58■■□□□ 1.69
LINC00449-201ENST00000366259 CC2D2AQ9P2K1 1620 aa25.52■■□□□ 1.68
LINC00449-201ENST00000366259 CECR2Q9BXF3 1484 aa25.45■■□□□ 1.66
LINC00449-201ENST00000366259 EIF4G1Q04637 1599 aaKnown RBP25.42■■□□□ 1.66
LINC00449-201ENST00000366259 NCAPD3P42695 1498 aa24.54■■□□□ 1.52
LINC00449-201ENST00000366259 DNAJC5Q9H3Z4 198 aa24.51■■□□□ 1.51
LINC00449-201ENST00000366259 ATAD2BQ9ULI0 1458 aa24.47■■□□□ 1.51
LINC00449-201ENST00000366259 SMARCA4P51532 1647 aa24.43■■□□□ 1.5
LINC00449-201ENST00000366259 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
LINC00449-201ENST00000366259 SMARCA2P51531 1590 aa24.37■■□□□ 1.49
LINC00449-201ENST00000366259 CUX2O14529 1486 aa24.34■■□□□ 1.49
LINC00449-201ENST00000366259 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
LINC00449-201ENST00000366259 NESP48681 1621 aa24.28■■□□□ 1.48
LINC00449-201ENST00000366259 BAZ1AQ9NRL2 1556 aaPredicted RBP24.26■■□□□ 1.47
LINC00449-201ENST00000366259 BAZ1BQ9UIG0 1483 aaKnown RBP24.22■■□□□ 1.47
LINC00449-201ENST00000366259 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
LINC00449-201ENST00000366259 MROH2BQ7Z745 1585 aa24.13■■□□□ 1.45
LINC00449-201ENST00000366259 THOC2Q8NI27 1593 aaKnown RBP24.01■■□□□ 1.43
LINC00449-201ENST00000366259 LAMC3Q9Y6N6 1575 aa24.01■■□□□ 1.43
LINC00449-201ENST00000366259 KIF21AQ7Z4S6 1674 aa23.97■■□□□ 1.43
LINC00449-201ENST00000366259 WIZO95785 1651 aa23.86■■□□□ 1.41
LINC00449-201ENST00000366259 PDS5BQ9NTI5 1447 aa23.86■■□□□ 1.41
LINC00449-201ENST00000366259 CADPSQ9ULU8 1353 aa23.8■■□□□ 1.4
LINC00449-201ENST00000366259 MRC2Q9UBG0 1479 aa23.68■■□□□ 1.38
LINC00449-201ENST00000366259 WDR62O43379 1518 aa23.62■■□□□ 1.37
LINC00449-201ENST00000366259 CEP164Q9UPV0 1460 aa23.57■■□□□ 1.36
LINC00449-201ENST00000366259 RSF1Q96T23 1441 aaPredicted RBP23.57■■□□□ 1.36
LINC00449-201ENST00000366259 FANCD2Q9BXW9 1451 aa23.55■■□□□ 1.36
LINC00449-201ENST00000366259 CFTRP13569 1480 aa23.5■■□□□ 1.35
LINC00449-201ENST00000366259 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
LINC00449-201ENST00000366259 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
LINC00449-201ENST00000366259 URB2Q14146 1524 aaKnown RBP23.38■■□□□ 1.33
LINC00449-201ENST00000366259 PRDM2Q13029 1718 aa23.31■■□□□ 1.32
LINC00449-201ENST00000366259 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
LINC00449-201ENST00000366259 OSCARQ8IYS5 282 aa23.24■■□□□ 1.31
LINC00449-201ENST00000366259 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
LINC00449-201ENST00000366259 TOPBP1Q92547 1522 aa23.09■■□□□ 1.29
LINC00449-201ENST00000366259 IFT140Q96RY7 1462 aa23.09■■□□□ 1.29
LINC00449-201ENST00000366259 RIMBP3CA6NJZ7 1639 aa23■■□□□ 1.27
LINC00449-201ENST00000366259 RIMBP3BA6NNM3 1639 aa23■■□□□ 1.27
LINC00449-201ENST00000366259 RIMBP3Q9UFD9 1639 aa23■■□□□ 1.27
LINC00449-201ENST00000366259 DNMBPQ6XZF7 1577 aa22.98■■□□□ 1.27
LINC00449-201ENST00000366259 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
LINC00449-201ENST00000366259 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
LINC00449-201ENST00000366259 TARBP1Q13395 1621 aaKnown RBP22.91■■□□□ 1.26
LINC00449-201ENST00000366259 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.26
LINC00449-201ENST00000366259 ARHGEF11O15085 1522 aa22.88■■□□□ 1.25
LINC00449-201ENST00000366259 CHD1O14646 1710 aa22.88■■□□□ 1.25
LINC00449-201ENST00000366259 POLA1P09884 1462 aaPredicted RBP22.85■■□□□ 1.25
LINC00449-201ENST00000366259 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
LINC00449-201ENST00000366259 FBLN2P98095 1184 aa22.79■■□□□ 1.24
LINC00449-201ENST00000366259 CYB5RLQ6IPT4 315 aa22.76■■□□□ 1.23
LINC00449-201ENST00000366259 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
LINC00449-201ENST00000366259 SOGA1O94964 1423 aa22.74■■□□□ 1.23
LINC00449-201ENST00000366259 FGD5Q6ZNL6 1462 aa22.7■■□□□ 1.22
LINC00449-201ENST00000366259 CUX1P39880 1505 aa22.67■■□□□ 1.22
LINC00449-201ENST00000366259 ARAP1Q96P48 1450 aa22.66■■□□□ 1.22
LINC00449-201ENST00000366259 SNAPC4Q5SXM2 1469 aa22.65■■□□□ 1.22
LINC00449-201ENST00000366259 WDR97A6NE52 1622 aa22.58■■□□□ 1.21
LINC00449-201ENST00000366259 CHMP7Q8WUX9 453 aaPredicted RBP22.56■■□□□ 1.2
LINC00449-201ENST00000366259 CLASP1Q7Z460 1538 aa22.55■■□□□ 1.2
LINC00449-201ENST00000366259 TRHP20396 242 aaPredicted RBP22.54■■□□□ 1.2
LINC00449-201ENST00000366259 GRIN2BQ13224 1484 aa22.54■■□□□ 1.2
LINC00449-201ENST00000366259 MAGI1Q96QZ7 1491 aaPredicted RBP22.54■■□□□ 1.2
LINC00449-201ENST00000366259 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
LINC00449-201ENST00000366259 PBRM1Q86U86 1689 aa22.5■■□□□ 1.19
LINC00449-201ENST00000366259 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
LINC00449-201ENST00000366259 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
LINC00449-201ENST00000366259 GAPVD1Q14C86 1478 aa22.46■■□□□ 1.19
LINC00449-201ENST00000366259 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
LINC00449-201ENST00000366259 ABCA5Q8WWZ7 1642 aa22.4■■□□□ 1.18
LINC00449-201ENST00000366259 WRNQ14191 1432 aaPredicted RBP eCLIP22.29■■□□□ 1.16
LINC00449-201ENST00000366259 BIVM-ERCC5R4GMW8 1640 aa22.26■■□□□ 1.15
LINC00449-201ENST00000366259 GRIN2AQ12879 1464 aa22.26■■□□□ 1.15
LINC00449-201ENST00000366259 ERCC6L2Q5T890 1561 aa22.25■■□□□ 1.15
LINC00449-201ENST00000366259 TOP2BQ02880 1626 aa22.25■■□□□ 1.15
LINC00449-201ENST00000366259 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
LINC00449-201ENST00000366259 CEP170Q5SW79 1584 aa22.22■■□□□ 1.15
LINC00449-201ENST00000366259 NUP160Q12769 1436 aa22.17■■□□□ 1.14
LINC00449-201ENST00000366259 FHAD1B1AJZ9 1412 aa22.15■■□□□ 1.14
LINC00449-201ENST00000366259 ERICH3Q5RHP9 1530 aa22.11■■□□□ 1.13
LINC00449-201ENST00000366259 SHROOM2Q13796 1616 aa22.11■■□□□ 1.13
LINC00449-201ENST00000366259 PRG4Q92954 1404 aaPredicted RBP22■■□□□ 1.11
LINC00449-201ENST00000366259 JPH4Q96JJ6 628 aa21.99■■□□□ 1.11
LINC00449-201ENST00000366259 KIF13AQ9H1H9 1805 aa21.94■■□□□ 1.1
LINC00449-201ENST00000366259 AEBP2Q6ZN18 517 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms