RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 NISCHQ9Y2I1 1504 aa32.17■■■□□ 2.74
LINC01996-201ENST00000573270 CCDC180Q9P1Z9 1646 aa28.51■■■□□ 2.15
LINC01996-201ENST00000573270 ABCC9O60706 1549 aa27.33■■□□□ 1.97
LINC01996-201ENST00000573270 ZCCHC6Q5VYS8 1495 aaKnown RBP26.97■■□□□ 1.91
LINC01996-201ENST00000573270 DCAF1Q9Y4B6 1507 aa26.63■■□□□ 1.85
LINC01996-201ENST00000573270 NACADO15069 1562 aa26.57■■□□□ 1.84
LINC01996-201ENST00000573270 MYO15BQ96JP2 1530 aa26.53■■□□□ 1.84
LINC01996-201ENST00000573270 RB1CC1Q8TDY2 1594 aa26.52■■□□□ 1.84
LINC01996-201ENST00000573270 DCAF8L2P0C7V8 631 aa26.5■■□□□ 1.83
LINC01996-201ENST00000573270 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.77
LINC01996-201ENST00000573270 SCRIBQ14160 1630 aa26.08■■□□□ 1.77
LINC01996-201ENST00000573270 BICRAQ9NZM4 1560 aa25.74■■□□□ 1.71
LINC01996-201ENST00000573270 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
LINC01996-201ENST00000573270 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
LINC01996-201ENST00000573270 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
LINC01996-201ENST00000573270 EIF4G1Q04637 1599 aaKnown RBP25.01■■□□□ 1.59
LINC01996-201ENST00000573270 SMARCA4P51532 1647 aa24.95■■□□□ 1.58
LINC01996-201ENST00000573270 BAZ1AQ9NRL2 1556 aaPredicted RBP24.93■■□□□ 1.58
LINC01996-201ENST00000573270 AEBP2Q6ZN18 517 aaPredicted RBP24.92■■□□□ 1.58
LINC01996-201ENST00000573270 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
LINC01996-201ENST00000573270 CC2D2AQ9P2K1 1620 aa24.79■■□□□ 1.56
LINC01996-201ENST00000573270 WIZO95785 1651 aa24.66■■□□□ 1.54
LINC01996-201ENST00000573270 RSF1Q96T23 1441 aaPredicted RBP24.65■■□□□ 1.54
LINC01996-201ENST00000573270 PEG3Q9GZU2 1588 aa24.64■■□□□ 1.54
LINC01996-201ENST00000573270 DNAJC5BQ9UF47 199 aa24.63■■□□□ 1.53
LINC01996-201ENST00000573270 SMARCA2P51531 1590 aa24.61■■□□□ 1.53
LINC01996-201ENST00000573270 ATAD2BQ9ULI0 1458 aa24.58■■□□□ 1.52
LINC01996-201ENST00000573270 HMGXB3Q12766 1538 aa24.5■■□□□ 1.51
LINC01996-201ENST00000573270 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.5
LINC01996-201ENST00000573270 NCAPD3P42695 1498 aa24.44■■□□□ 1.5
LINC01996-201ENST00000573270 TOP2AP11388 1531 aaKnown RBP24.4■■□□□ 1.5
LINC01996-201ENST00000573270 SUPT5HO00267 1087 aaKnown RBP24.32■■□□□ 1.48
LINC01996-201ENST00000573270 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
LINC01996-201ENST00000573270 PRDM2Q13029 1718 aa23.85■■□□□ 1.41
LINC01996-201ENST00000573270 NESP48681 1621 aa23.82■■□□□ 1.4
LINC01996-201ENST00000573270 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
LINC01996-201ENST00000573270 CFTRP13569 1480 aa23.75■■□□□ 1.39
LINC01996-201ENST00000573270 CADPSQ9ULU8 1353 aa23.73■■□□□ 1.39
LINC01996-201ENST00000573270 KIF21AQ7Z4S6 1674 aa23.67■■□□□ 1.38
LINC01996-201ENST00000573270 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
LINC01996-201ENST00000573270 PDS5BQ9NTI5 1447 aa23.53■■□□□ 1.36
LINC01996-201ENST00000573270 ERCC6Q03468 1493 aa23.51■■□□□ 1.35
LINC01996-201ENST00000573270 CEP164Q9UPV0 1460 aa23.5■■□□□ 1.35
LINC01996-201ENST00000573270 THOC2Q8NI27 1593 aaKnown RBP23.45■■□□□ 1.34
LINC01996-201ENST00000573270 ABCC8Q09428 1581 aa23.41■■□□□ 1.34
LINC01996-201ENST00000573270 MRC2Q9UBG0 1479 aa23.36■■□□□ 1.33
LINC01996-201ENST00000573270 URB2Q14146 1524 aaKnown RBP23.33■■□□□ 1.32
LINC01996-201ENST00000573270 DNMBPQ6XZF7 1577 aa23.31■■□□□ 1.32
LINC01996-201ENST00000573270 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
LINC01996-201ENST00000573270 WDR62O43379 1518 aa23.31■■□□□ 1.32
LINC01996-201ENST00000573270 SYNJ1O43426 1573 aa23.3■■□□□ 1.32
LINC01996-201ENST00000573270 CUX1P39880 1505 aa23.29■■□□□ 1.32
LINC01996-201ENST00000573270 BIVM-ERCC5R4GMW8 1640 aa23.28■■□□□ 1.32
LINC01996-201ENST00000573270 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
LINC01996-201ENST00000573270 TOPBP1Q92547 1522 aa23.25■■□□□ 1.31
LINC01996-201ENST00000573270 TOP2BQ02880 1626 aa23.23■■□□□ 1.31
LINC01996-201ENST00000573270 FGD5Q6ZNL6 1462 aa23.12■■□□□ 1.29
LINC01996-201ENST00000573270 POLA1P09884 1462 aaPredicted RBP23.09■■□□□ 1.29
LINC01996-201ENST00000573270 CUX2O14529 1486 aa23.06■■□□□ 1.28
LINC01996-201ENST00000573270 WDR97A6NE52 1622 aa23.05■■□□□ 1.28
LINC01996-201ENST00000573270 TARBP1Q13395 1621 aaKnown RBP23.01■■□□□ 1.27
LINC01996-201ENST00000573270 RAD54L2Q9Y4B4 1467 aa22.97■■□□□ 1.27
LINC01996-201ENST00000573270 IFT140Q96RY7 1462 aa22.95■■□□□ 1.26
LINC01996-201ENST00000573270 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
LINC01996-201ENST00000573270 SOGA1O94964 1423 aa22.9■■□□□ 1.26
LINC01996-201ENST00000573270 EIF4G3O43432 1585 aaKnown RBP22.89■■□□□ 1.26
LINC01996-201ENST00000573270 ABCA10Q8WWZ4 1543 aa22.88■■□□□ 1.25
LINC01996-201ENST00000573270 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
LINC01996-201ENST00000573270 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
LINC01996-201ENST00000573270 PBRM1Q86U86 1689 aa22.83■■□□□ 1.24
LINC01996-201ENST00000573270 TDRD9Q8NDG6 1382 aaKnown RBP22.73■■□□□ 1.23
LINC01996-201ENST00000573270 AQRO60306 1485 aaKnown RBP eCLIP22.71■■□□□ 1.23
LINC01996-201ENST00000573270 GAPVD1Q14C86 1478 aa22.7■■□□□ 1.22
LINC01996-201ENST00000573270 RUSC2Q8N2Y8 1516 aa22.7■■□□□ 1.22
LINC01996-201ENST00000573270 KIF27Q86VH2 1401 aa22.69■■□□□ 1.22
LINC01996-201ENST00000573270 GRIN2BQ13224 1484 aa22.63■■□□□ 1.21
LINC01996-201ENST00000573270 ADAMTS12P58397 1594 aa22.63■■□□□ 1.21
LINC01996-201ENST00000573270 ERICH3Q5RHP9 1530 aa22.62■■□□□ 1.21
LINC01996-201ENST00000573270 SNAPC4Q5SXM2 1469 aa22.61■■□□□ 1.21
LINC01996-201ENST00000573270 CUL7Q14999 1698 aa22.61■■□□□ 1.21
LINC01996-201ENST00000573270 EEA1Q15075 1411 aa22.58■■□□□ 1.21
LINC01996-201ENST00000573270 MAGI1Q96QZ7 1491 aaPredicted RBP22.54■■□□□ 1.2
LINC01996-201ENST00000573270 CHD1O14646 1710 aa22.54■■□□□ 1.2
LINC01996-201ENST00000573270 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
LINC01996-201ENST00000573270 IGF1RP08069 1367 aa22.48■■□□□ 1.19
LINC01996-201ENST00000573270 KIF21BO75037 1637 aa22.45■■□□□ 1.18
LINC01996-201ENST00000573270 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
LINC01996-201ENST00000573270 SYNJ2O15056 1496 aa22.44■■□□□ 1.18
LINC01996-201ENST00000573270 PRXQ9BXM0 1461 aa22.41■■□□□ 1.18
LINC01996-201ENST00000573270 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
LINC01996-201ENST00000573270 CARMIL1Q5VZK9 1371 aa22.38■■□□□ 1.17
LINC01996-201ENST00000573270 CSRNP3Q8WYN3 585 aa22.37■■□□□ 1.17
LINC01996-201ENST00000573270 RAPGEF2Q9Y4G8 1499 aa22.36■■□□□ 1.17
LINC01996-201ENST00000573270 CEP170Q5SW79 1584 aa22.33■■□□□ 1.16
LINC01996-201ENST00000573270 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.16
LINC01996-201ENST00000573270 GOLGA3Q08378 1498 aa22.29■■□□□ 1.16
LINC01996-201ENST00000573270 FBLN2P98095 1184 aa22.26■■□□□ 1.15
LINC01996-201ENST00000573270 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
LINC01996-201ENST00000573270 NUP160Q12769 1436 aa22.23■■□□□ 1.15
LINC01996-201ENST00000573270 CLASP1Q7Z460 1538 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms