Protein–RNA interactions for Protein: Q9HCB6

SPON1, Spondin-1, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPON1Q9HCB6 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SPON1Q9HCB6 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPON1Q9HCB6 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC17.09■□□□□ 0.33
SPON1Q9HCB6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPON1Q9HCB6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
SPON1Q9HCB6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPON1Q9HCB6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPON1Q9HCB6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
SPON1Q9HCB6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SPON1Q9HCB6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPON1Q9HCB6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.09■□□□□ 0.33
SPON1Q9HCB6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.09■□□□□ 0.33
SPON1Q9HCB6 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPON1Q9HCB6 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC17.08■□□□□ 0.33
SPON1Q9HCB6 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SPON1Q9HCB6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPON1Q9HCB6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPON1Q9HCB6 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPON1Q9HCB6 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SPON1Q9HCB6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SPON1Q9HCB6 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPON1Q9HCB6 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 KRT8P42-201ENST00000405771 1399 ntBASIC17.08■□□□□ 0.32
SPON1Q9HCB6 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 MARCKSL1P2-201ENST00000401037 976 ntBASIC17.08■□□□□ 0.32
SPON1Q9HCB6 HMGA1P1-201ENST00000415560 1062 ntBASIC17.08■□□□□ 0.32
SPON1Q9HCB6 AC017081.1-201ENST00000420063 823 ntBASIC17.08■□□□□ 0.32
SPON1Q9HCB6 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 NKAPP1-203ENST00000554109 573 ntTSL 4 BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 AL109983.1-201ENST00000603234 646 ntBASIC17.08■□□□□ 0.32
SPON1Q9HCB6 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPON1Q9HCB6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 AL513477.1-201ENST00000602865 2407 ntBASIC17.07■□□□□ 0.32
SPON1Q9HCB6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 MIR602-201ENST00000384960 98 ntBASIC17.07■□□□□ 0.32
SPON1Q9HCB6 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 BICD1P1-201ENST00000457832 1222 ntBASIC17.07■□□□□ 0.32
SPON1Q9HCB6 TPI1P2-201ENST00000491343 752 ntBASIC17.07■□□□□ 0.32
SPON1Q9HCB6 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 AC064862.6-203ENST00000605139 691 ntTSL 5 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 AC112693.3-201ENST00000624819 1983 ntBASIC17.07■□□□□ 0.32
SPON1Q9HCB6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.07■□□□□ 0.32
SPON1Q9HCB6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 USP8-219ENST00000625664 1568 ntTSL 5 BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SPON1Q9HCB6 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms