RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 NISCHQ9Y2I1 1504 aa31.58■■■□□ 2.65
TUBD1-202ENST00000340993 CCDC180Q9P1Z9 1646 aa27.93■■■□□ 2.06
TUBD1-202ENST00000340993 ABCC9O60706 1549 aa27.36■■□□□ 1.97
TUBD1-202ENST00000340993 DCAF8L2P0C7V8 631 aa26.59■■□□□ 1.85
TUBD1-202ENST00000340993 ZCCHC6Q5VYS8 1495 aaKnown RBP26.35■■□□□ 1.81
TUBD1-202ENST00000340993 RB1CC1Q8TDY2 1594 aa26.23■■□□□ 1.79
TUBD1-202ENST00000340993 NACADO15069 1562 aa26.2■■□□□ 1.78
TUBD1-202ENST00000340993 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
TUBD1-202ENST00000340993 MYO15BQ96JP2 1530 aa25.96■■□□□ 1.75
TUBD1-202ENST00000340993 UNC13AQ9UPW8 1703 aa25.79■■□□□ 1.72
TUBD1-202ENST00000340993 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
TUBD1-202ENST00000340993 PABPN1Q86U42 306 aaKnown RBP eCLIP25.65■■□□□ 1.7
TUBD1-202ENST00000340993 BICRAQ9NZM4 1560 aa25.47■■□□□ 1.67
TUBD1-202ENST00000340993 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
TUBD1-202ENST00000340993 DNAJC5BQ9UF47 199 aa24.9■■□□□ 1.58
TUBD1-202ENST00000340993 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
TUBD1-202ENST00000340993 CECR2Q9BXF3 1484 aa24.69■■□□□ 1.54
TUBD1-202ENST00000340993 CC2D2AQ9P2K1 1620 aa24.69■■□□□ 1.54
TUBD1-202ENST00000340993 SMARCA4P51532 1647 aa24.51■■□□□ 1.51
TUBD1-202ENST00000340993 BAZ1AQ9NRL2 1556 aaPredicted RBP24.45■■□□□ 1.5
TUBD1-202ENST00000340993 MROH2BQ7Z745 1585 aa24.43■■□□□ 1.5
TUBD1-202ENST00000340993 ATAD2BQ9ULI0 1458 aa24.28■■□□□ 1.48
TUBD1-202ENST00000340993 WIZO95785 1651 aa24.24■■□□□ 1.47
TUBD1-202ENST00000340993 SMARCA2P51531 1590 aa24.23■■□□□ 1.47
TUBD1-202ENST00000340993 RSF1Q96T23 1441 aaPredicted RBP24.17■■□□□ 1.46
TUBD1-202ENST00000340993 NCAPD3P42695 1498 aa24.15■■□□□ 1.46
TUBD1-202ENST00000340993 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
TUBD1-202ENST00000340993 PEG3Q9GZU2 1588 aa24.13■■□□□ 1.45
TUBD1-202ENST00000340993 HMGXB3Q12766 1538 aa24.08■■□□□ 1.44
TUBD1-202ENST00000340993 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.42
TUBD1-202ENST00000340993 TOP2AP11388 1531 aaKnown RBP23.87■■□□□ 1.41
TUBD1-202ENST00000340993 NESP48681 1621 aa23.74■■□□□ 1.39
TUBD1-202ENST00000340993 CCDC88BA6NC98 1476 aa23.63■■□□□ 1.37
TUBD1-202ENST00000340993 ERCC6Q03468 1493 aa23.54■■□□□ 1.36
TUBD1-202ENST00000340993 LAMC3Q9Y6N6 1575 aa23.53■■□□□ 1.36
TUBD1-202ENST00000340993 CADPSQ9ULU8 1353 aa23.53■■□□□ 1.36
TUBD1-202ENST00000340993 KIF21AQ7Z4S6 1674 aa23.47■■□□□ 1.35
TUBD1-202ENST00000340993 CFTRP13569 1480 aa23.41■■□□□ 1.34
TUBD1-202ENST00000340993 PDS5BQ9NTI5 1447 aa23.37■■□□□ 1.33
TUBD1-202ENST00000340993 PRDM2Q13029 1718 aa23.33■■□□□ 1.33
TUBD1-202ENST00000340993 FANCD2Q9BXW9 1451 aa23.32■■□□□ 1.32
TUBD1-202ENST00000340993 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
TUBD1-202ENST00000340993 THOC2Q8NI27 1593 aaKnown RBP23.24■■□□□ 1.31
TUBD1-202ENST00000340993 MRC2Q9UBG0 1479 aa23.16■■□□□ 1.3
TUBD1-202ENST00000340993 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
TUBD1-202ENST00000340993 WDR62O43379 1518 aa23.06■■□□□ 1.28
TUBD1-202ENST00000340993 CUX2O14529 1486 aa23.04■■□□□ 1.28
TUBD1-202ENST00000340993 TOPBP1Q92547 1522 aa22.97■■□□□ 1.27
TUBD1-202ENST00000340993 ABCC8Q09428 1581 aa22.96■■□□□ 1.27
TUBD1-202ENST00000340993 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
TUBD1-202ENST00000340993 CUX1P39880 1505 aa22.89■■□□□ 1.26
TUBD1-202ENST00000340993 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
TUBD1-202ENST00000340993 WRNQ14191 1432 aaPredicted RBP eCLIP22.8■■□□□ 1.24
TUBD1-202ENST00000340993 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
TUBD1-202ENST00000340993 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
TUBD1-202ENST00000340993 RAD54L2Q9Y4B4 1467 aa22.77■■□□□ 1.24
TUBD1-202ENST00000340993 ZNF608Q9ULD9 1512 aaPredicted RBP22.72■■□□□ 1.23
TUBD1-202ENST00000340993 IFT140Q96RY7 1462 aa22.71■■□□□ 1.23
TUBD1-202ENST00000340993 TOP2BQ02880 1626 aa22.7■■□□□ 1.22
TUBD1-202ENST00000340993 BIVM-ERCC5R4GMW8 1640 aa22.7■■□□□ 1.22
TUBD1-202ENST00000340993 SOGA1O94964 1423 aa22.69■■□□□ 1.22
TUBD1-202ENST00000340993 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
TUBD1-202ENST00000340993 EIF4G3O43432 1585 aaKnown RBP22.62■■□□□ 1.21
TUBD1-202ENST00000340993 AQRO60306 1485 aaKnown RBP eCLIP22.62■■□□□ 1.21
TUBD1-202ENST00000340993 TDRD9Q8NDG6 1382 aaKnown RBP22.62■■□□□ 1.21
TUBD1-202ENST00000340993 WDR97A6NE52 1622 aa22.57■■□□□ 1.2
TUBD1-202ENST00000340993 ABCA10Q8WWZ4 1543 aa22.48■■□□□ 1.19
TUBD1-202ENST00000340993 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
TUBD1-202ENST00000340993 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
TUBD1-202ENST00000340993 GAPVD1Q14C86 1478 aa22.43■■□□□ 1.18
TUBD1-202ENST00000340993 ABCA5Q8WWZ7 1642 aa22.43■■□□□ 1.18
TUBD1-202ENST00000340993 FBLN2P98095 1184 aa22.4■■□□□ 1.18
TUBD1-202ENST00000340993 SNAPC4Q5SXM2 1469 aa22.4■■□□□ 1.18
TUBD1-202ENST00000340993 GRIN2BQ13224 1484 aa22.37■■□□□ 1.17
TUBD1-202ENST00000340993 CHD1O14646 1710 aa22.35■■□□□ 1.17
TUBD1-202ENST00000340993 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.16
TUBD1-202ENST00000340993 RUSC2Q8N2Y8 1516 aa22.29■■□□□ 1.16
TUBD1-202ENST00000340993 KIF27Q86VH2 1401 aa22.28■■□□□ 1.16
TUBD1-202ENST00000340993 CHMP7Q8WUX9 453 aaPredicted RBP22.26■■□□□ 1.15
TUBD1-202ENST00000340993 MAGI1Q96QZ7 1491 aaPredicted RBP22.25■■□□□ 1.15
TUBD1-202ENST00000340993 ADAMTS12P58397 1594 aa22.22■■□□□ 1.15
TUBD1-202ENST00000340993 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
TUBD1-202ENST00000340993 OSCARQ8IYS5 282 aa22.2■■□□□ 1.14
TUBD1-202ENST00000340993 FAM9AQ8IZU1 332 aaPredicted RBP22.2■■□□□ 1.14
TUBD1-202ENST00000340993 SYNJ2O15056 1496 aa22.2■■□□□ 1.14
TUBD1-202ENST00000340993 IGF1RP08069 1367 aa22.15■■□□□ 1.14
TUBD1-202ENST00000340993 DNAJC5Q9H3Z4 198 aa22.15■■□□□ 1.14
TUBD1-202ENST00000340993 FHAD1B1AJZ9 1412 aa22.13■■□□□ 1.13
TUBD1-202ENST00000340993 GRIN2AQ12879 1464 aa22.1■■□□□ 1.13
TUBD1-202ENST00000340993 CUL7Q14999 1698 aa22.09■■□□□ 1.13
TUBD1-202ENST00000340993 CARMIL1Q5VZK9 1371 aa22.06■■□□□ 1.12
TUBD1-202ENST00000340993 EHMT2Q96KQ7 1210 aa22.06■■□□□ 1.12
TUBD1-202ENST00000340993 CEP170Q5SW79 1584 aa22.04■■□□□ 1.12
TUBD1-202ENST00000340993 CLASP1Q7Z460 1538 aa21.97■■□□□ 1.11
TUBD1-202ENST00000340993 CSRNP3Q8WYN3 585 aa21.96■■□□□ 1.11
TUBD1-202ENST00000340993 NUP160Q12769 1436 aa21.94■■□□□ 1.1
TUBD1-202ENST00000340993 RAPGEF2Q9Y4G8 1499 aa21.94■■□□□ 1.1
TUBD1-202ENST00000340993 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
TUBD1-202ENST00000340993 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
TUBD1-202ENST00000340993 RIMBP3Q9UFD9 1639 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms