RNA–Protein interactions for RNA: ENST00000369049.8

ECM1-203, Transcript of extracellular matrix protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECM1, Length 1,925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-203ENST00000369049 NISCHQ9Y2I1 1504 aa30.58■■■□□ 2.49
ECM1-203ENST00000369049 CCDC180Q9P1Z9 1646 aa27.39■■□□□ 1.98
ECM1-203ENST00000369049 ABCC9O60706 1549 aa27.05■■□□□ 1.92
ECM1-203ENST00000369049 RB1CC1Q8TDY2 1594 aa25.97■■□□□ 1.75
ECM1-203ENST00000369049 NACADO15069 1562 aa25.86■■□□□ 1.73
ECM1-203ENST00000369049 DCAF8L2P0C7V8 631 aa25.67■■□□□ 1.7
ECM1-203ENST00000369049 MYO15BQ96JP2 1530 aa25.62■■□□□ 1.69
ECM1-203ENST00000369049 ZCCHC6Q5VYS8 1495 aaKnown RBP25.39■■□□□ 1.65
ECM1-203ENST00000369049 DCAF1Q9Y4B6 1507 aa25.35■■□□□ 1.65
ECM1-203ENST00000369049 UNC13AQ9UPW8 1703 aa25.24■■□□□ 1.63
ECM1-203ENST00000369049 PABPN1Q86U42 306 aaKnown RBP eCLIP25.2■■□□□ 1.62
ECM1-203ENST00000369049 DNAJC5BQ9UF47 199 aa25.09■■□□□ 1.61
ECM1-203ENST00000369049 BICRAQ9NZM4 1560 aa25.09■■□□□ 1.61
ECM1-203ENST00000369049 SHROOM4Q9ULL8 1493 aa24.97■■□□□ 1.59
ECM1-203ENST00000369049 SCRIBQ14160 1630 aa24.87■■□□□ 1.57
ECM1-203ENST00000369049 EIF4G1Q04637 1599 aaKnown RBP24.5■■□□□ 1.51
ECM1-203ENST00000369049 CC2D2AQ9P2K1 1620 aa24.47■■□□□ 1.51
ECM1-203ENST00000369049 CECR2Q9BXF3 1484 aa24.4■■□□□ 1.5
ECM1-203ENST00000369049 NCAPD3P42695 1498 aa23.84■■□□□ 1.41
ECM1-203ENST00000369049 SMARCA4P51532 1647 aa23.79■■□□□ 1.4
ECM1-203ENST00000369049 SMARCA2P51531 1590 aa23.77■■□□□ 1.4
ECM1-203ENST00000369049 BAZ1AQ9NRL2 1556 aaPredicted RBP23.76■■□□□ 1.39
ECM1-203ENST00000369049 ATAD2BQ9ULI0 1458 aa23.76■■□□□ 1.39
ECM1-203ENST00000369049 HMGXB3Q12766 1538 aa23.7■■□□□ 1.38
ECM1-203ENST00000369049 PEG3Q9GZU2 1588 aa23.6■■□□□ 1.37
ECM1-203ENST00000369049 BAZ1BQ9UIG0 1483 aaKnown RBP23.57■■□□□ 1.36
ECM1-203ENST00000369049 MROH2BQ7Z745 1585 aa23.5■■□□□ 1.35
ECM1-203ENST00000369049 ERCC6Q03468 1493 aa23.42■■□□□ 1.34
ECM1-203ENST00000369049 CUX2O14529 1486 aa23.34■■□□□ 1.33
ECM1-203ENST00000369049 LAMC3Q9Y6N6 1575 aa23.28■■□□□ 1.32
ECM1-203ENST00000369049 NESP48681 1621 aa23.27■■□□□ 1.32
ECM1-203ENST00000369049 WIZO95785 1651 aa23.22■■□□□ 1.31
ECM1-203ENST00000369049 PDS5BQ9NTI5 1447 aa23.17■■□□□ 1.3
ECM1-203ENST00000369049 RSF1Q96T23 1441 aaPredicted RBP23.14■■□□□ 1.29
ECM1-203ENST00000369049 CADPSQ9ULU8 1353 aa23.12■■□□□ 1.29
ECM1-203ENST00000369049 THOC2Q8NI27 1593 aaKnown RBP23.04■■□□□ 1.28
ECM1-203ENST00000369049 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
ECM1-203ENST00000369049 KIF21AQ7Z4S6 1674 aa23.01■■□□□ 1.27
ECM1-203ENST00000369049 DNAJC5Q9H3Z4 198 aa23■■□□□ 1.27
ECM1-203ENST00000369049 MRC2Q9UBG0 1479 aa22.91■■□□□ 1.26
ECM1-203ENST00000369049 CFTRP13569 1480 aa22.9■■□□□ 1.26
ECM1-203ENST00000369049 CEP164Q9UPV0 1460 aa22.86■■□□□ 1.25
ECM1-203ENST00000369049 FANCD2Q9BXW9 1451 aa22.84■■□□□ 1.25
ECM1-203ENST00000369049 WDR62O43379 1518 aa22.83■■□□□ 1.25
ECM1-203ENST00000369049 CCDC88BA6NC98 1476 aa22.72■■□□□ 1.23
ECM1-203ENST00000369049 PRDM2Q13029 1718 aa22.69■■□□□ 1.22
ECM1-203ENST00000369049 URB2Q14146 1524 aaKnown RBP22.59■■□□□ 1.21
ECM1-203ENST00000369049 ABCC8Q09428 1581 aa22.51■■□□□ 1.19
ECM1-203ENST00000369049 IFT140Q96RY7 1462 aa22.43■■□□□ 1.18
ECM1-203ENST00000369049 TOPBP1Q92547 1522 aa22.42■■□□□ 1.18
ECM1-203ENST00000369049 DNMBPQ6XZF7 1577 aa22.39■■□□□ 1.17
ECM1-203ENST00000369049 OSCARQ8IYS5 282 aa22.3■■□□□ 1.16
ECM1-203ENST00000369049 SUPT5HO00267 1087 aaKnown RBP22.25■■□□□ 1.15
ECM1-203ENST00000369049 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
ECM1-203ENST00000369049 POLA1P09884 1462 aaPredicted RBP22.19■■□□□ 1.14
ECM1-203ENST00000369049 TARBP1Q13395 1621 aaKnown RBP22.19■■□□□ 1.14
ECM1-203ENST00000369049 EIF4G3O43432 1585 aaKnown RBP22.18■■□□□ 1.14
ECM1-203ENST00000369049 SOGA1O94964 1423 aa22.13■■□□□ 1.13
ECM1-203ENST00000369049 WDR97A6NE52 1622 aa22.12■■□□□ 1.13
ECM1-203ENST00000369049 AQRO60306 1485 aaKnown RBP eCLIP22.09■■□□□ 1.13
ECM1-203ENST00000369049 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
ECM1-203ENST00000369049 CUX1P39880 1505 aa22.08■■□□□ 1.13
ECM1-203ENST00000369049 RAD54L2Q9Y4B4 1467 aa22.07■■□□□ 1.12
ECM1-203ENST00000369049 TRIM41Q8WV44 630 aa22.04■■□□□ 1.12
ECM1-203ENST00000369049 TDRD9Q8NDG6 1382 aaKnown RBP22■■□□□ 1.11
ECM1-203ENST00000369049 CHD1O14646 1710 aa21.94■■□□□ 1.1
ECM1-203ENST00000369049 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
ECM1-203ENST00000369049 FBLN2P98095 1184 aa21.94■■□□□ 1.1
ECM1-203ENST00000369049 MAGI1Q96QZ7 1491 aaPredicted RBP21.93■■□□□ 1.1
ECM1-203ENST00000369049 SNAPC4Q5SXM2 1469 aa21.91■■□□□ 1.1
ECM1-203ENST00000369049 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
ECM1-203ENST00000369049 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
ECM1-203ENST00000369049 RIMBP3Q9UFD9 1639 aa21.9■■□□□ 1.1
ECM1-203ENST00000369049 ABCA10Q8WWZ4 1543 aa21.89■■□□□ 1.09
ECM1-203ENST00000369049 WRNQ14191 1432 aaPredicted RBP eCLIP21.88■■□□□ 1.09
ECM1-203ENST00000369049 ARHGEF11O15085 1522 aa21.87■■□□□ 1.09
ECM1-203ENST00000369049 GAPVD1Q14C86 1478 aa21.87■■□□□ 1.09
ECM1-203ENST00000369049 CHMP7Q8WUX9 453 aaPredicted RBP21.87■■□□□ 1.09
ECM1-203ENST00000369049 TOP2BQ02880 1626 aa21.84■■□□□ 1.09
ECM1-203ENST00000369049 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
ECM1-203ENST00000369049 SYNJ2O15056 1496 aa21.84■■□□□ 1.09
ECM1-203ENST00000369049 SYNJ1O43426 1573 aa21.81■■□□□ 1.08
ECM1-203ENST00000369049 ABCA5Q8WWZ7 1642 aa21.81■■□□□ 1.08
ECM1-203ENST00000369049 PBRM1Q86U86 1689 aa21.81■■□□□ 1.08
ECM1-203ENST00000369049 CLASP1Q7Z460 1538 aa21.74■■□□□ 1.07
ECM1-203ENST00000369049 CYB5RLQ6IPT4 315 aa21.69■■□□□ 1.06
ECM1-203ENST00000369049 ARAP1Q96P48 1450 aa21.65■■□□□ 1.06
ECM1-203ENST00000369049 ERICH3Q5RHP9 1530 aa21.65■■□□□ 1.06
ECM1-203ENST00000369049 FHAD1B1AJZ9 1412 aa21.63■■□□□ 1.05
ECM1-203ENST00000369049 ADAMTS12P58397 1594 aa21.63■■□□□ 1.05
ECM1-203ENST00000369049 GRIN2AQ12879 1464 aa21.62■■□□□ 1.05
ECM1-203ENST00000369049 NUP160Q12769 1436 aa21.55■■□□□ 1.04
ECM1-203ENST00000369049 CEP170Q5SW79 1584 aa21.49■■□□□ 1.03
ECM1-203ENST00000369049 KIF27Q86VH2 1401 aa21.47■■□□□ 1.03
ECM1-203ENST00000369049 SHROOM2Q13796 1616 aa21.42■■□□□ 1.02
ECM1-203ENST00000369049 TRHP20396 242 aaPredicted RBP21.41■■□□□ 1.02
ECM1-203ENST00000369049 CUL7Q14999 1698 aa21.38■■□□□ 1.01
ECM1-203ENST00000369049 IGF1RP08069 1367 aa21.37■■□□□ 1.01
ECM1-203ENST00000369049 JPH4Q96JJ6 628 aa21.33■■□□□ 1.01
ECM1-203ENST00000369049 ERCC6L2Q5T890 1561 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms