Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.4□□□□□ -0.1
SEMA3CQ99985 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.4□□□□□ -0.1
SEMA3CQ99985 MIR6769A-201ENST00000617340 73 ntBASIC14.4□□□□□ -0.1
SEMA3CQ99985 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SEMA3CQ99985 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEMA3CQ99985 BEND3P1-201ENST00000421591 1944 ntBASIC14.4□□□□□ -0.1
SEMA3CQ99985 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SEMA3CQ99985 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEMA3CQ99985 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEMA3CQ99985 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SEMA3CQ99985 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
SEMA3CQ99985 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEMA3CQ99985 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
SEMA3CQ99985 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEMA3CQ99985 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.4□□□□□ -0.1
SEMA3CQ99985 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.4□□□□□ -0.1
SEMA3CQ99985 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEMA3CQ99985 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SEMA3CQ99985 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 AC023794.5-201ENST00000564380 2157 ntBASIC14.39□□□□□ -0.11
SEMA3CQ99985 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 KRT17P5-201ENST00000332088 839 ntBASIC14.39□□□□□ -0.11
SEMA3CQ99985 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 LDHBP1-201ENST00000455730 1119 ntBASIC14.39□□□□□ -0.11
SEMA3CQ99985 ALG1L13P-202ENST00000519320 584 ntBASIC14.39□□□□□ -0.11
SEMA3CQ99985 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 AL161670.2-201ENST00000557650 1227 ntBASIC14.39□□□□□ -0.11
SEMA3CQ99985 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 SPCS2P2-201ENST00000603270 608 ntBASIC14.39□□□□□ -0.11
SEMA3CQ99985 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 AP001505.2-201ENST00000616815 443 ntBASIC14.39□□□□□ -0.11
SEMA3CQ99985 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.39□□□□□ -0.11
SEMA3CQ99985 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SEMA3CQ99985 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SEMA3CQ99985 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.38□□□□□ -0.11
SEMA3CQ99985 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SEMA3CQ99985 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.38□□□□□ -0.11
SEMA3CQ99985 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.38□□□□□ -0.11
SEMA3CQ99985 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SEMA3CQ99985 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SEMA3CQ99985 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms