Protein–RNA interactions for Protein: P07498

CSN3, Kappa-casein, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3P07498 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CSN3P07498 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CSN3P07498 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.31□□□□□ -0.6
CSN3P07498 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.31□□□□□ -0.6
CSN3P07498 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CSN3P07498 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CSN3P07498 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.31□□□□□ -0.6
CSN3P07498 AC118758.2-201ENST00000614242 2813 ntBASIC11.31□□□□□ -0.6
CSN3P07498 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CSN3P07498 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
CSN3P07498 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
CSN3P07498 AC015802.1-201ENST00000588104 1449 ntBASIC11.3□□□□□ -0.6
CSN3P07498 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
CSN3P07498 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 AC100850.1-201ENST00000506768 649 ntBASIC11.3□□□□□ -0.6
CSN3P07498 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC11.3□□□□□ -0.6
CSN3P07498 AC131206.1-201ENST00000538078 1211 ntBASIC11.3□□□□□ -0.6
CSN3P07498 RNF41-210ENST00000552244 716 ntTSL 3 BASIC11.3□□□□□ -0.6
CSN3P07498 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
CSN3P07498 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC11.3□□□□□ -0.6
CSN3P07498 MIR4538-201ENST00000581377 78 ntBASIC11.3□□□□□ -0.6
CSN3P07498 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 AL136301.1-201ENST00000615830 422 ntBASIC11.3□□□□□ -0.6
CSN3P07498 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC11.3□□□□□ -0.6
CSN3P07498 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC11.3□□□□□ -0.6
CSN3P07498 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CSN3P07498 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 AL118506.1-201ENST00000601296 3082 ntBASIC11.3□□□□□ -0.6
CSN3P07498 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CSN3P07498 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
CSN3P07498 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CSN3P07498 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
CSN3P07498 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.3□□□□□ -0.6
CSN3P07498 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CSN3P07498 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSN3P07498 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CSN3P07498 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CSN3P07498 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CSN3P07498 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.29□□□□□ -0.6
CSN3P07498 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSN3P07498 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC11.29□□□□□ -0.6
CSN3P07498 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.29□□□□□ -0.6
CSN3P07498 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSN3P07498 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.29□□□□□ -0.6
CSN3P07498 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC11.29□□□□□ -0.6
CSN3P07498 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSN3P07498 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSN3P07498 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSN3P07498 CR383656.2-201ENST00000548656 2254 ntBASIC11.29□□□□□ -0.6
CSN3P07498 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CSN3P07498 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CSN3P07498 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.29□□□□□ -0.6
CSN3P07498 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CSN3P07498 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms