Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 AL157996.1-201ENST00000624684 2299 ntBASIC9.68□□□□□ -0.86
CXCL5P42830 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
CXCL5P42830 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 AC007614.5-201ENST00000623424 8892 ntBASIC9.68□□□□□ -0.86
CXCL5P42830 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC9.68□□□□□ -0.86
CXCL5P42830 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
CXCL5P42830 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
CXCL5P42830 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC9.68□□□□□ -0.86
CXCL5P42830 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 HARS-202ENST00000415192 1401 ntTSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 NSL1-201ENST00000366976 722 ntTSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 CALY-202ENST00000368555 783 ntTSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC9.68□□□□□ -0.86
CXCL5P42830 AC004890.2-204ENST00000481968 304 ntBASIC9.68□□□□□ -0.86
CXCL5P42830 REEP4-207ENST00000523293 913 ntTSL 3 BASIC9.68□□□□□ -0.86
CXCL5P42830 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC9.68□□□□□ -0.86
CXCL5P42830 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 BAP1-211ENST00000615113 489 ntBASIC9.68□□□□□ -0.86
CXCL5P42830 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC9.68□□□□□ -0.86
CXCL5P42830 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 AC072061.1-201ENST00000569710 2234 ntBASIC9.68□□□□□ -0.86
CXCL5P42830 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC9.68□□□□□ -0.86
CXCL5P42830 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC9.68□□□□□ -0.86
CXCL5P42830 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC9.68□□□□□ -0.86
CXCL5P42830 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC9.68□□□□□ -0.86
CXCL5P42830 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CXCL5P42830 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
CXCL5P42830 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CXCL5P42830 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
CXCL5P42830 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC9.67□□□□□ -0.86
CXCL5P42830 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CXCL5P42830 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CXCL5P42830 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
CXCL5P42830 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
CXCL5P42830 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CXCL5P42830 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
CXCL5P42830 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
CXCL5P42830 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC9.67□□□□□ -0.86
CXCL5P42830 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CXCL5P42830 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CXCL5P42830 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
CXCL5P42830 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CXCL5P42830 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC9.67□□□□□ -0.86
CXCL5P42830 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
CXCL5P42830 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC9.67□□□□□ -0.86
CXCL5P42830 AL391825.1-201ENST00000457671 1364 ntBASIC9.67□□□□□ -0.86
CXCL5P42830 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
CXCL5P42830 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms