RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 DCAF8L2P0C7V8 631 aa21.34■■□□□ 1.01
RAB3IP-212ENST00000550536 NISCHQ9Y2I1 1504 aa20.31■□□□□ 0.84
RAB3IP-212ENST00000550536 SUPT5HO00267 1087 aaKnown RBP20.2■□□□□ 0.82
RAB3IP-212ENST00000550536 PELP1Q8IZL8 1130 aaKnown RBP19.96■□□□□ 0.79
RAB3IP-212ENST00000550536 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
RAB3IP-212ENST00000550536 EHMT2Q96KQ7 1210 aa19.69■□□□□ 0.74
RAB3IP-212ENST00000550536 APLP2Q06481 763 aa19.63■□□□□ 0.73
RAB3IP-212ENST00000550536 FAM9AQ8IZU1 332 aaPredicted RBP19.46■□□□□ 0.71
RAB3IP-212ENST00000550536 TTBK1Q5TCY1 1321 aaPredicted RBP19.1■□□□□ 0.65
RAB3IP-212ENST00000550536 CCER1Q8TC90 406 aaPredicted RBP19.03■□□□□ 0.64
RAB3IP-212ENST00000550536 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
RAB3IP-212ENST00000550536 PCGF6Q9BYE7 350 aa19■□□□□ 0.63
RAB3IP-212ENST00000550536 CENPBP07199 599 aaPredicted RBP18.98■□□□□ 0.63
RAB3IP-212ENST00000550536 ZEB1P37275 1124 aaPredicted RBP18.92■□□□□ 0.62
RAB3IP-212ENST00000550536 RANGAP1P46060 587 aaPredicted RBP18.88■□□□□ 0.61
RAB3IP-212ENST00000550536 ATP1B4Q9UN42 357 aaPredicted RBP18.84■□□□□ 0.61
RAB3IP-212ENST00000550536 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
RAB3IP-212ENST00000550536 NEFLP07196 543 aa18.69■□□□□ 0.58
RAB3IP-212ENST00000550536 UBTFP17480 764 aaKnown RBP18.69■□□□□ 0.58
RAB3IP-212ENST00000550536 YTHDC1Q96MU7 727 aaKnown RBP18.46■□□□□ 0.55
RAB3IP-212ENST00000550536 MYT1Q01538 1121 aa18.44■□□□□ 0.54
RAB3IP-212ENST00000550536 DAXXQ9UER7 740 aaPredicted RBP18.31■□□□□ 0.52
RAB3IP-212ENST00000550536 MYT1LQ9UL68 1186 aa18.21■□□□□ 0.51
RAB3IP-212ENST00000550536 TRIM26Q12899 539 aaPredicted RBP18.21■□□□□ 0.51
RAB3IP-212ENST00000550536 PPARGC1BQ86YN6 1023 aaKnown RBP18.2■□□□□ 0.5
RAB3IP-212ENST00000550536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.14■□□□□ 0.49
RAB3IP-212ENST00000550536 HNRNPUL2Q1KMD3 747 aaKnown RBP18.14■□□□□ 0.49
RAB3IP-212ENST00000550536 POLR3GLQ9BT43 218 aa18.11■□□□□ 0.49
RAB3IP-212ENST00000550536 ITGAEP38570 1179 aa18.08■□□□□ 0.49
RAB3IP-212ENST00000550536 SLC4A1APQ9BWU0 796 aaKnown RBP17.92■□□□□ 0.46
RAB3IP-212ENST00000550536 HRCP23327 699 aa17.92■□□□□ 0.46
RAB3IP-212ENST00000550536 CHIC1Q5VXU3 224 aa17.91■□□□□ 0.46
RAB3IP-212ENST00000550536 ZNF316A6NFI3 1004 aaPredicted RBP17.87■□□□□ 0.45
RAB3IP-212ENST00000550536 CNGB1Q14028 1251 aaPredicted RBP17.84■□□□□ 0.45
RAB3IP-212ENST00000550536 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
RAB3IP-212ENST00000550536 RTL5Q5HYW3 569 aaPredicted RBP17.76■□□□□ 0.43
RAB3IP-212ENST00000550536 LOC105371045A0A1W2PR82 267 aa17.73■□□□□ 0.43
RAB3IP-212ENST00000550536 FAM50AQ14320 339 aaKnown RBP17.68■□□□□ 0.42
RAB3IP-212ENST00000550536 DIEXFQ68CQ4 756 aaKnown RBP17.67■□□□□ 0.42
RAB3IP-212ENST00000550536 TRIM52Q96A61 297 aa17.57■□□□□ 0.4
RAB3IP-212ENST00000550536 ZBTB47Q9UFB7 747 aaPredicted RBP17.52■□□□□ 0.4
RAB3IP-212ENST00000550536 ABCC9O60706 1549 aa17.5■□□□□ 0.39
RAB3IP-212ENST00000550536 NEUROD1Q13562 356 aa17.49■□□□□ 0.39
RAB3IP-212ENST00000550536 ANP32CO43423 234 aa17.45■□□□□ 0.38
RAB3IP-212ENST00000550536 ZNF326Q5BKZ1 582 aaKnown RBP17.42■□□□□ 0.38
RAB3IP-212ENST00000550536 CANXP27824 592 aaKnown RBP17.39■□□□□ 0.37
RAB3IP-212ENST00000550536 CDK11AQ9UQ88 783 aaPredicted RBP17.37■□□□□ 0.37
RAB3IP-212ENST00000550536 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
RAB3IP-212ENST00000550536 NEFMP07197 916 aa17.34■□□□□ 0.37
RAB3IP-212ENST00000550536 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
RAB3IP-212ENST00000550536 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
RAB3IP-212ENST00000550536 FBLN2P98095 1184 aa17.3■□□□□ 0.36
RAB3IP-212ENST00000550536 BCANQ96GW7 911 aa17.29■□□□□ 0.36
RAB3IP-212ENST00000550536 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
RAB3IP-212ENST00000550536 BCL11AQ9H165 835 aa17.22■□□□□ 0.35
RAB3IP-212ENST00000550536 GTF3C3Q9Y5Q9 886 aa17.21■□□□□ 0.35
RAB3IP-212ENST00000550536 ANP32AP39687 249 aaKnown RBP17.17■□□□□ 0.34
RAB3IP-212ENST00000550536 ANP32BQ92688 251 aaKnown RBP17.05■□□□□ 0.32
RAB3IP-212ENST00000550536 ESF1Q9H501 851 aaKnown RBP17.05■□□□□ 0.32
RAB3IP-212ENST00000550536 ARID3CA6NKF2 412 aa17.04■□□□□ 0.32
RAB3IP-212ENST00000550536 ZNF777Q9ULD5 760 aaPredicted RBP17.03■□□□□ 0.32
RAB3IP-212ENST00000550536 P3H3Q8IVL6 736 aa17.03■□□□□ 0.32
RAB3IP-212ENST00000550536 HSP90AA1P07900 732 aaKnown RBP17.03■□□□□ 0.32
RAB3IP-212ENST00000550536 TONSLQ96HA7 1378 aa17■□□□□ 0.31
RAB3IP-212ENST00000550536 UPF2Q9HAU5 1272 aaKnown RBP16.98■□□□□ 0.31
RAB3IP-212ENST00000550536 NPM2Q86SE8 214 aaKnown RBP16.96■□□□□ 0.31
RAB3IP-212ENST00000550536 STAG3Q9UJ98 1225 aa16.95■□□□□ 0.3
RAB3IP-212ENST00000550536 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.3
RAB3IP-212ENST00000550536 ACIN1Q9UKV3 1341 aaKnown RBP16.88■□□□□ 0.29
RAB3IP-212ENST00000550536 DCAF1Q9Y4B6 1507 aa16.84■□□□□ 0.29
RAB3IP-212ENST00000550536 CHGAP10645 457 aaKnown RBP16.83■□□□□ 0.28
RAB3IP-212ENST00000550536 HNRNPUQ00839 825 aaKnown RBP eCLIP16.8■□□□□ 0.28
RAB3IP-212ENST00000550536 FKBP8Q14318 412 aa16.79■□□□□ 0.28
RAB3IP-212ENST00000550536 NPM1P06748 294 aaKnown RBP eCLIP16.78■□□□□ 0.28
RAB3IP-212ENST00000550536 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.78■□□□□ 0.28
RAB3IP-212ENST00000550536 ZCCHC6Q5VYS8 1495 aaKnown RBP16.76■□□□□ 0.27
RAB3IP-212ENST00000550536 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
RAB3IP-212ENST00000550536 FAM9BQ8IZU0 186 aa16.76■□□□□ 0.27
RAB3IP-212ENST00000550536 RB1CC1Q8TDY2 1594 aa16.75■□□□□ 0.27
RAB3IP-212ENST00000550536 TMC1Q8TDI8 760 aa16.74■□□□□ 0.27
RAB3IP-212ENST00000550536 WDR43Q15061 677 aaKnown RBP eCLIP16.73■□□□□ 0.27
RAB3IP-212ENST00000550536 EIF5BO60841 1220 aaKnown RBP16.72■□□□□ 0.27
RAB3IP-212ENST00000550536 MYH16Q9H6N6 1097 aa16.7■□□□□ 0.26
RAB3IP-212ENST00000550536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.265e-6■■■■□ 19.5
RAB3IP-212ENST00000550536 CCDC136Q96JN2 1154 aa16.7■□□□□ 0.26
RAB3IP-212ENST00000550536 GLIPR1L2Q4G1C9 344 aa16.69■□□□□ 0.26
RAB3IP-212ENST00000550536 DDX10Q13206 875 aaKnown RBP16.68■□□□□ 0.26
RAB3IP-212ENST00000550536 MTUS2Q5JR59 1369 aa16.66■□□□□ 0.26
RAB3IP-212ENST00000550536 SALL2Q9Y467 1007 aaPredicted RBP16.66■□□□□ 0.26
RAB3IP-212ENST00000550536 SCAF1Q9H7N4 1312 aaKnown RBP16.62■□□□□ 0.25
RAB3IP-212ENST00000550536 CHIC2Q9UKJ5 165 aa16.62■□□□□ 0.25
RAB3IP-212ENST00000550536 NBR1Q14596 966 aa16.6■□□□□ 0.25
RAB3IP-212ENST00000550536 TSPY4P0CV99 314 aa16.6■□□□□ 0.25
RAB3IP-212ENST00000550536 TSPY10P0CW01 314 aa16.6■□□□□ 0.25
RAB3IP-212ENST00000550536 CDK11BP21127 795 aaKnown RBP16.59■□□□□ 0.25
RAB3IP-212ENST00000550536 KDM2AQ9Y2K7 1162 aa16.58■□□□□ 0.24
RAB3IP-212ENST00000550536 MRS2Q9HD23 443 aa16.58■□□□□ 0.24
RAB3IP-212ENST00000550536 CLIP1P30622 1438 aa16.56■□□□□ 0.24
RAB3IP-212ENST00000550536 ARXQ96QS3 562 aa16.55■□□□□ 0.24
RAB3IP-212ENST00000550536 RSF1Q96T23 1441 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms