RNA–Protein interactions for RNA: ENST00000423302.6

MRVI1-201, Transcript of murine retrovirus integration site 1 homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MRVI1, Length 6,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRVI1-201ENST00000423302 DCAF8L2P0C7V8 631 aa22.69■■□□□ 1.22
MRVI1-201ENST00000423302 EHMT2Q96KQ7 1210 aa21.34■■□□□ 1.01
MRVI1-201ENST00000423302 SUPT5HO00267 1087 aaKnown RBP21.29■■□□□ 1
MRVI1-201ENST00000423302 SHROOM4Q9ULL8 1493 aa20.87■□□□□ 0.93
MRVI1-201ENST00000423302 TTBK1Q5TCY1 1321 aaPredicted RBP20.55■□□□□ 0.88
MRVI1-201ENST00000423302 FAM9AQ8IZU1 332 aaPredicted RBP20.31■□□□□ 0.84
MRVI1-201ENST00000423302 RANGAP1P46060 587 aaPredicted RBP20.26■□□□□ 0.83
MRVI1-201ENST00000423302 APLP2Q06481 763 aa20.25■□□□□ 0.83
MRVI1-201ENST00000423302 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
MRVI1-201ENST00000423302 PCGF6Q9BYE7 350 aa19.98■□□□□ 0.79
MRVI1-201ENST00000423302 ATP1B4Q9UN42 357 aaPredicted RBP19.96■□□□□ 0.79
MRVI1-201ENST00000423302 ERICH6Q7L0X2 663 aa19.8■□□□□ 0.76
MRVI1-201ENST00000423302 NISCHQ9Y2I1 1504 aa19.77■□□□□ 0.76
MRVI1-201ENST00000423302 YTHDC1Q96MU7 727 aaKnown RBP19.61■□□□□ 0.73
MRVI1-201ENST00000423302 CCER1Q8TC90 406 aaPredicted RBP19.6■□□□□ 0.73
MRVI1-201ENST00000423302 PPARGC1BQ86YN6 1023 aaKnown RBP19.54■□□□□ 0.72
MRVI1-201ENST00000423302 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
MRVI1-201ENST00000423302 TRIM41Q8WV44 630 aa19.44■□□□□ 0.7
MRVI1-201ENST00000423302 CENPBP07199 599 aaPredicted RBP19.44■□□□□ 0.7
MRVI1-201ENST00000423302 CNGB1Q14028 1251 aaPredicted RBP19.3■□□□□ 0.68
MRVI1-201ENST00000423302 POLR3GLQ9BT43 218 aa19.27■□□□□ 0.68
MRVI1-201ENST00000423302 MYT1LQ9UL68 1186 aa19.26■□□□□ 0.67
MRVI1-201ENST00000423302 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
MRVI1-201ENST00000423302 NEFLP07196 543 aa19.24■□□□□ 0.67
MRVI1-201ENST00000423302 MYT1Q01538 1121 aa19.24■□□□□ 0.67
MRVI1-201ENST00000423302 ITGAEP38570 1179 aa19.19■□□□□ 0.66
MRVI1-201ENST00000423302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.11■□□□□ 0.65
MRVI1-201ENST00000423302 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
MRVI1-201ENST00000423302 ZEB1P37275 1124 aaPredicted RBP19.09■□□□□ 0.65
MRVI1-201ENST00000423302 SLC4A1APQ9BWU0 796 aaKnown RBP18.95■□□□□ 0.62
MRVI1-201ENST00000423302 DAXXQ9UER7 740 aaPredicted RBP18.9■□□□□ 0.62
MRVI1-201ENST00000423302 LOC105371045A0A1W2PR82 267 aa18.71■□□□□ 0.59
MRVI1-201ENST00000423302 TRIM26Q12899 539 aaPredicted RBP18.62■□□□□ 0.57
MRVI1-201ENST00000423302 HRCP23327 699 aa18.59■□□□□ 0.57
MRVI1-201ENST00000423302 CLSPNQ9HAW4 1339 aa18.57■□□□□ 0.56
MRVI1-201ENST00000423302 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
MRVI1-201ENST00000423302 ZNF316A6NFI3 1004 aaPredicted RBP18.47■□□□□ 0.55
MRVI1-201ENST00000423302 FAM50AQ14320 339 aaKnown RBP18.45■□□□□ 0.54
MRVI1-201ENST00000423302 BCANQ96GW7 911 aa18.42■□□□□ 0.54
MRVI1-201ENST00000423302 NEUROD1Q13562 356 aa18.42■□□□□ 0.54
MRVI1-201ENST00000423302 SLC24A1O60721 1099 aa18.41■□□□□ 0.54
MRVI1-201ENST00000423302 TRIM52Q96A61 297 aa18.41■□□□□ 0.54
MRVI1-201ENST00000423302 ZNF326Q5BKZ1 582 aaKnown RBP18.39■□□□□ 0.53
MRVI1-201ENST00000423302 RTL5Q5HYW3 569 aaPredicted RBP18.31■□□□□ 0.52
MRVI1-201ENST00000423302 DIEXFQ68CQ4 756 aaKnown RBP18.25■□□□□ 0.51
MRVI1-201ENST00000423302 FBLN2P98095 1184 aa18.25■□□□□ 0.51
MRVI1-201ENST00000423302 ARID3CA6NKF2 412 aa18.24■□□□□ 0.51
MRVI1-201ENST00000423302 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.51
MRVI1-201ENST00000423302 PLPPR3Q6T4P5 718 aa18.15■□□□□ 0.5
MRVI1-201ENST00000423302 ZBTB47Q9UFB7 747 aaPredicted RBP18.09■□□□□ 0.49
MRVI1-201ENST00000423302 CANXP27824 592 aaKnown RBP18.06■□□□□ 0.48
MRVI1-201ENST00000423302 P3H3Q8IVL6 736 aa18.04■□□□□ 0.48
MRVI1-201ENST00000423302 GTF3C3Q9Y5Q9 886 aa17.98■□□□□ 0.47
MRVI1-201ENST00000423302 ANP32CO43423 234 aa17.97■□□□□ 0.47
MRVI1-201ENST00000423302 ZNF777Q9ULD5 760 aaPredicted RBP17.93■□□□□ 0.46
MRVI1-201ENST00000423302 NPM2Q86SE8 214 aaKnown RBP17.92■□□□□ 0.46
MRVI1-201ENST00000423302 CDK11AQ9UQ88 783 aaPredicted RBP17.9■□□□□ 0.46
MRVI1-201ENST00000423302 ABCC9O60706 1549 aa17.83■□□□□ 0.44
MRVI1-201ENST00000423302 NEFMP07197 916 aa17.82■□□□□ 0.44
MRVI1-201ENST00000423302 CHGAP10645 457 aaKnown RBP17.81■□□□□ 0.44
MRVI1-201ENST00000423302 SENP3Q9H4L4 574 aaPredicted RBP17.79■□□□□ 0.44
MRVI1-201ENST00000423302 SALL2Q9Y467 1007 aaPredicted RBP17.78■□□□□ 0.44
MRVI1-201ENST00000423302 PLEKHG5O94827 1062 aa17.74■□□□□ 0.43
MRVI1-201ENST00000423302 STAG3Q9UJ98 1225 aa17.69■□□□□ 0.42
MRVI1-201ENST00000423302 ESF1Q9H501 851 aaKnown RBP17.67■□□□□ 0.42
MRVI1-201ENST00000423302 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
MRVI1-201ENST00000423302 A0A0G2JS52 829 aa17.65■□□□□ 0.42
MRVI1-201ENST00000423302 ARXQ96QS3 562 aa17.65■□□□□ 0.42
MRVI1-201ENST00000423302 ANP32AP39687 249 aaKnown RBP17.61■□□□□ 0.41
MRVI1-201ENST00000423302 EIF5BO60841 1220 aaKnown RBP17.6■□□□□ 0.41
MRVI1-201ENST00000423302 HSP90AA1P07900 732 aaKnown RBP17.6■□□□□ 0.41
MRVI1-201ENST00000423302 FAM9BQ8IZU0 186 aa17.59■□□□□ 0.41
MRVI1-201ENST00000423302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.57■□□□□ 0.4
MRVI1-201ENST00000423302 FKBP8Q14318 412 aa17.56■□□□□ 0.4
MRVI1-201ENST00000423302 ZBTB7CA1YPR0 619 aa17.55■□□□□ 0.4
MRVI1-201ENST00000423302 CHIC2Q9UKJ5 165 aa17.51■□□□□ 0.39
MRVI1-201ENST00000423302 HNRNPUQ00839 825 aaKnown RBP eCLIP17.48■□□□□ 0.39
MRVI1-201ENST00000423302 SENP3-EIF4A1A0A087X0R7 540 aa17.48■□□□□ 0.39
MRVI1-201ENST00000423302 DDX10Q13206 875 aaKnown RBP17.47■□□□□ 0.39
MRVI1-201ENST00000423302 NBR1Q14596 966 aa17.46■□□□□ 0.39
MRVI1-201ENST00000423302 KDM2AQ9Y2K7 1162 aa17.45■□□□□ 0.38
MRVI1-201ENST00000423302 IRX6P78412 446 aaPredicted RBP17.43■□□□□ 0.38
MRVI1-201ENST00000423302 HIRIP3Q9BW71 556 aaPredicted RBP17.43■□□□□ 0.38
MRVI1-201ENST00000423302 ACIN1Q9UKV3 1341 aaKnown RBP17.42■□□□□ 0.38
MRVI1-201ENST00000423302 ANP32BQ92688 251 aaKnown RBP17.41■□□□□ 0.38
MRVI1-201ENST00000423302 C14orf37Q86TY3 774 aa17.38■□□□□ 0.37
MRVI1-201ENST00000423302 TONSLQ96HA7 1378 aa17.37■□□□□ 0.37
MRVI1-201ENST00000423302 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
MRVI1-201ENST00000423302 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
MRVI1-201ENST00000423302 UPF2Q9HAU5 1272 aaKnown RBP17.34■□□□□ 0.37
MRVI1-201ENST00000423302 TPRNQ4KMQ1 711 aa17.32■□□□□ 0.36
MRVI1-201ENST00000423302 TMC1Q8TDI8 760 aa17.3■□□□□ 0.36
MRVI1-201ENST00000423302 TULP1O00294 542 aaPredicted RBP17.3■□□□□ 0.36
MRVI1-201ENST00000423302 CCDC136Q96JN2 1154 aa17.28■□□□□ 0.36
MRVI1-201ENST00000423302 WDR43Q15061 677 aaKnown RBP eCLIP17.27■□□□□ 0.36
MRVI1-201ENST00000423302 TAOK2Q9UL54 1235 aa17.23■□□□□ 0.35
MRVI1-201ENST00000423302 MRS2Q9HD23 443 aa17.2■□□□□ 0.34
MRVI1-201ENST00000423302 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.19■□□□□ 0.34
MRVI1-201ENST00000423302 KCNH8Q96L42 1107 aa17.19■□□□□ 0.34
MRVI1-201ENST00000423302 PPM1GO15355 546 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms