Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
POLR3DP05423 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
POLR3DP05423 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
POLR3DP05423 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
POLR3DP05423 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.02■□□□□ 0.31
POLR3DP05423 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.01■□□□□ 0.31
POLR3DP05423 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 AC074138.1-201ENST00000611182 1303 ntBASIC17.01■□□□□ 0.31
POLR3DP05423 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
POLR3DP05423 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
POLR3DP05423 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
POLR3DP05423 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.01■□□□□ 0.31
POLR3DP05423 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.01■□□□□ 0.31
POLR3DP05423 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.01■□□□□ 0.31
POLR3DP05423 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
POLR3DP05423 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.01■□□□□ 0.31
POLR3DP05423 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 MPRIPP1-201ENST00000452433 1089 ntBASIC17.01■□□□□ 0.31
POLR3DP05423 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.01■□□□□ 0.31
POLR3DP05423 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.01■□□□□ 0.31
POLR3DP05423 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 SPCS2P2-201ENST00000603270 608 ntBASIC17.01■□□□□ 0.31
POLR3DP05423 AC009560.1-201ENST00000620208 434 ntBASIC17.01■□□□□ 0.31
POLR3DP05423 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
POLR3DP05423 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
POLR3DP05423 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC17.01■□□□□ 0.31
POLR3DP05423 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
POLR3DP05423 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
POLR3DP05423 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
POLR3DP05423 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.01■□□□□ 0.31
POLR3DP05423 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.01■□□□□ 0.31
POLR3DP05423 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17■□□□□ 0.31
POLR3DP05423 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC17■□□□□ 0.31
POLR3DP05423 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17■□□□□ 0.31
POLR3DP05423 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17■□□□□ 0.31
POLR3DP05423 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17■□□□□ 0.31
POLR3DP05423 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC17■□□□□ 0.31
POLR3DP05423 FOS-204ENST00000554617 796 ntTSL 2 BASIC17■□□□□ 0.31
POLR3DP05423 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17■□□□□ 0.31
POLR3DP05423 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC17■□□□□ 0.31
POLR3DP05423 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17■□□□□ 0.31
POLR3DP05423 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17■□□□□ 0.31
POLR3DP05423 AC005632.3-201ENST00000605544 308 ntBASIC17■□□□□ 0.31
POLR3DP05423 AC073352.2-201ENST00000609385 439 ntBASIC17■□□□□ 0.31
POLR3DP05423 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
POLR3DP05423 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17■□□□□ 0.31
POLR3DP05423 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17■□□□□ 0.31
POLR3DP05423 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
POLR3DP05423 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17■□□□□ 0.31
POLR3DP05423 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17■□□□□ 0.31
POLR3DP05423 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
POLR3DP05423 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
POLR3DP05423 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
POLR3DP05423 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.99■□□□□ 0.31
POLR3DP05423 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
POLR3DP05423 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
POLR3DP05423 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
POLR3DP05423 AC010327.5-201ENST00000586923 3061 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms