Protein–RNA interactions for Protein: P01137

TGFB1, Transforming growth factor beta-1, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1P01137 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.68□□□□□ -0.22
TGFB1P01137 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.68□□□□□ -0.22
TGFB1P01137 HMGA1P1-201ENST00000415560 1062 ntBASIC13.68□□□□□ -0.22
TGFB1P01137 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.68□□□□□ -0.22
TGFB1P01137 AC078875.1-201ENST00000431907 724 ntBASIC13.68□□□□□ -0.22
TGFB1P01137 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TGFB1P01137 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 KRT18P15-201ENST00000458108 1291 ntBASIC13.68□□□□□ -0.22
TGFB1P01137 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.68□□□□□ -0.22
TGFB1P01137 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.68□□□□□ -0.22
TGFB1P01137 AC044849.1-201ENST00000519737 1188 ntBASIC13.68□□□□□ -0.22
TGFB1P01137 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.68□□□□□ -0.22
TGFB1P01137 AC009779.1-201ENST00000551138 283 ntBASIC13.68□□□□□ -0.22
TGFB1P01137 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.68□□□□□ -0.22
TGFB1P01137 RN7SL219P-201ENST00000582872 296 ntBASIC13.68□□□□□ -0.22
TGFB1P01137 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.68□□□□□ -0.22
TGFB1P01137 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.68□□□□□ -0.22
TGFB1P01137 AL118558.3-201ENST00000607414 1079 ntBASIC13.68□□□□□ -0.22
TGFB1P01137 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.68□□□□□ -0.22
TGFB1P01137 AL008638.5-201ENST00000623814 1298 ntBASIC13.68□□□□□ -0.22
TGFB1P01137 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TGFB1P01137 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.68□□□□□ -0.22
TGFB1P01137 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TGFB1P01137 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.68□□□□□ -0.22
TGFB1P01137 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TGFB1P01137 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.67□□□□□ -0.22
TGFB1P01137 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TGFB1P01137 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.67□□□□□ -0.22
TGFB1P01137 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.67□□□□□ -0.22
TGFB1P01137 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.67□□□□□ -0.22
TGFB1P01137 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
TGFB1P01137 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TGFB1P01137 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.67□□□□□ -0.22
TGFB1P01137 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 NKAIN1P1-201ENST00000435754 582 ntBASIC13.67□□□□□ -0.22
TGFB1P01137 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.67□□□□□ -0.22
TGFB1P01137 AC108725.1-201ENST00000495472 409 ntBASIC13.67□□□□□ -0.22
TGFB1P01137 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.67□□□□□ -0.22
TGFB1P01137 AC013355.1-201ENST00000562625 723 ntBASIC13.67□□□□□ -0.22
TGFB1P01137 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.67□□□□□ -0.22
TGFB1P01137 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
TGFB1P01137 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.67□□□□□ -0.22
TGFB1P01137 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.67□□□□□ -0.22
TGFB1P01137 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.67□□□□□ -0.22
TGFB1P01137 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
TGFB1P01137 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
TGFB1P01137 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.67□□□□□ -0.22
TGFB1P01137 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TGFB1P01137 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.67□□□□□ -0.22
TGFB1P01137 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TGFB1P01137 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TGFB1P01137 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TGFB1P01137 AL590824.1-201ENST00000403828 1349 ntBASIC13.66□□□□□ -0.22
TGFB1P01137 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TGFB1P01137 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TGFB1P01137 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.66□□□□□ -0.22
TGFB1P01137 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TGFB1P01137 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.66□□□□□ -0.22
TGFB1P01137 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TGFB1P01137 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TGFB1P01137 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TGFB1P01137 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TGFB1P01137 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TGFB1P01137 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.66□□□□□ -0.22
TGFB1P01137 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TGFB1P01137 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TGFB1P01137 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.66□□□□□ -0.22
TGFB1P01137 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TGFB1P01137 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms