Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 AC106047.2-201ENST00000511723 743 ntBASIC21.54■■□□□ 1.04
CCNB3Q8WWL7 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC21.54■■□□□ 1.04
CCNB3Q8WWL7 GOLGA2P7-209ENST00000560408 745 ntBASIC21.54■■□□□ 1.04
CCNB3Q8WWL7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNB3Q8WWL7 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC21.54■■□□□ 1.04
CCNB3Q8WWL7 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC21.54■■□□□ 1.04
CCNB3Q8WWL7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNB3Q8WWL7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCNB3Q8WWL7 AL139158.3-201ENST00000641212 1562 ntBASIC21.54■■□□□ 1.04
CCNB3Q8WWL7 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC21.54■■□□□ 1.04
CCNB3Q8WWL7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNB3Q8WWL7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 OR2W2P-201ENST00000406313 909 ntBASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 AC100858.1-201ENST00000514059 1228 ntBASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 AC090136.2-201ENST00000517809 420 ntBASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 RCC2P1-201ENST00000452257 1476 ntBASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNB3Q8WWL7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 LINC01230-201ENST00000625222 3017 ntBASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 AC026470.1-201ENST00000478038 846 ntBASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 ALG1L3P-201ENST00000503331 765 ntBASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 CYP4F36P-201ENST00000589193 186 ntBASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 TUBB4AP1-201ENST00000450755 1325 ntBASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CCNB3Q8WWL7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC21.52■■□□□ 1.03
CCNB3Q8WWL7 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CCNB3Q8WWL7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 AL109809.1-201ENST00000418979 1367 ntBASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC21.51■■□□□ 1.03
CCNB3Q8WWL7 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms