RNA–Protein interactions for RNA: ENST00000438323.2

IFI35-204, Transcript of interferon induced protein 35, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFI35, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFI35-204ENST00000438323 NISCHQ9Y2I1 1504 aa33.38■■■□□ 2.93
IFI35-204ENST00000438323 CCDC180Q9P1Z9 1646 aa29.63■■■□□ 2.33
IFI35-204ENST00000438323 ABCC9O60706 1549 aa29.59■■■□□ 2.33
IFI35-204ENST00000438323 DNAJC5BQ9UF47 199 aa28.47■■■□□ 2.15
IFI35-204ENST00000438323 RB1CC1Q8TDY2 1594 aa27.92■■■□□ 2.06
IFI35-204ENST00000438323 NACADO15069 1562 aa27.89■■■□□ 2.05
IFI35-204ENST00000438323 DCAF8L2P0C7V8 631 aa27.78■■■□□ 2.04
IFI35-204ENST00000438323 ZCCHC6Q5VYS8 1495 aaKnown RBP27.77■■■□□ 2.04
IFI35-204ENST00000438323 MYO15BQ96JP2 1530 aa27.76■■■□□ 2.03
IFI35-204ENST00000438323 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
IFI35-204ENST00000438323 UNC13AQ9UPW8 1703 aa27.4■■□□□ 1.98
IFI35-204ENST00000438323 PABPN1Q86U42 306 aaKnown RBP eCLIP27.38■■□□□ 1.97
IFI35-204ENST00000438323 BICRAQ9NZM4 1560 aa27.22■■□□□ 1.95
IFI35-204ENST00000438323 SCRIBQ14160 1630 aa27.01■■□□□ 1.92
IFI35-204ENST00000438323 DNAJC5Q9H3Z4 198 aa26.87■■□□□ 1.89
IFI35-204ENST00000438323 CECR2Q9BXF3 1484 aa26.8■■□□□ 1.88
IFI35-204ENST00000438323 SHROOM4Q9ULL8 1493 aa26.77■■□□□ 1.88
IFI35-204ENST00000438323 CC2D2AQ9P2K1 1620 aa26.75■■□□□ 1.87
IFI35-204ENST00000438323 EIF4G1Q04637 1599 aaKnown RBP26.5■■□□□ 1.83
IFI35-204ENST00000438323 CUX2O14529 1486 aa25.98■■□□□ 1.75
IFI35-204ENST00000438323 SMARCA4P51532 1647 aa25.88■■□□□ 1.73
IFI35-204ENST00000438323 NCAPD3P42695 1498 aa25.81■■□□□ 1.72
IFI35-204ENST00000438323 ATAD2BQ9ULI0 1458 aa25.8■■□□□ 1.72
IFI35-204ENST00000438323 BAZ1AQ9NRL2 1556 aaPredicted RBP25.8■■□□□ 1.72
IFI35-204ENST00000438323 MROH2BQ7Z745 1585 aa25.75■■□□□ 1.71
IFI35-204ENST00000438323 PEG3Q9GZU2 1588 aa25.68■■□□□ 1.7
IFI35-204ENST00000438323 SMARCA2P51531 1590 aa25.67■■□□□ 1.7
IFI35-204ENST00000438323 ERCC6Q03468 1493 aa25.66■■□□□ 1.7
IFI35-204ENST00000438323 HMGXB3Q12766 1538 aa25.61■■□□□ 1.69
IFI35-204ENST00000438323 BAZ1BQ9UIG0 1483 aaKnown RBP25.48■■□□□ 1.67
IFI35-204ENST00000438323 WIZO95785 1651 aa25.44■■□□□ 1.66
IFI35-204ENST00000438323 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
IFI35-204ENST00000438323 TRIM41Q8WV44 630 aa25.25■■□□□ 1.63
IFI35-204ENST00000438323 NESP48681 1621 aa25.21■■□□□ 1.63
IFI35-204ENST00000438323 THOC2Q8NI27 1593 aaKnown RBP25.15■■□□□ 1.62
IFI35-204ENST00000438323 TOP2AP11388 1531 aaKnown RBP25.12■■□□□ 1.61
IFI35-204ENST00000438323 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
IFI35-204ENST00000438323 CADPSQ9ULU8 1353 aa25.02■■□□□ 1.6
IFI35-204ENST00000438323 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
IFI35-204ENST00000438323 CFTRP13569 1480 aa24.88■■□□□ 1.57
IFI35-204ENST00000438323 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
IFI35-204ENST00000438323 PDS5BQ9NTI5 1447 aa24.87■■□□□ 1.57
IFI35-204ENST00000438323 FANCD2Q9BXW9 1451 aa24.7■■□□□ 1.54
IFI35-204ENST00000438323 MRC2Q9UBG0 1479 aa24.66■■□□□ 1.54
IFI35-204ENST00000438323 WDR62O43379 1518 aa24.64■■□□□ 1.53
IFI35-204ENST00000438323 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
IFI35-204ENST00000438323 SUPT5HO00267 1087 aaKnown RBP24.62■■□□□ 1.53
IFI35-204ENST00000438323 CEP164Q9UPV0 1460 aa24.62■■□□□ 1.53
IFI35-204ENST00000438323 PRDM2Q13029 1718 aa24.61■■□□□ 1.53
IFI35-204ENST00000438323 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
IFI35-204ENST00000438323 RIMBP3CA6NJZ7 1639 aa24.35■■□□□ 1.49
IFI35-204ENST00000438323 RIMBP3BA6NNM3 1639 aa24.35■■□□□ 1.49
IFI35-204ENST00000438323 RIMBP3Q9UFD9 1639 aa24.35■■□□□ 1.49
IFI35-204ENST00000438323 TOPBP1Q92547 1522 aa24.32■■□□□ 1.48
IFI35-204ENST00000438323 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
IFI35-204ENST00000438323 DNMBPQ6XZF7 1577 aa24.25■■□□□ 1.47
IFI35-204ENST00000438323 ARHGEF11O15085 1522 aa24.19■■□□□ 1.46
IFI35-204ENST00000438323 CUX1P39880 1505 aa24.14■■□□□ 1.45
IFI35-204ENST00000438323 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
IFI35-204ENST00000438323 ZNF608Q9ULD9 1512 aaPredicted RBP24.12■■□□□ 1.45
IFI35-204ENST00000438323 POLA1P09884 1462 aaPredicted RBP24.11■■□□□ 1.45
IFI35-204ENST00000438323 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
IFI35-204ENST00000438323 TRHP20396 242 aaPredicted RBP24.05■■□□□ 1.44
IFI35-204ENST00000438323 CYB5RLQ6IPT4 315 aa24.04■■□□□ 1.44
IFI35-204ENST00000438323 RAD54L2Q9Y4B4 1467 aa24.03■■□□□ 1.44
IFI35-204ENST00000438323 AEBP2Q6ZN18 517 aaPredicted RBP24.02■■□□□ 1.44
IFI35-204ENST00000438323 FGD5Q6ZNL6 1462 aa24.01■■□□□ 1.43
IFI35-204ENST00000438323 SOGA1O94964 1423 aa23.99■■□□□ 1.43
IFI35-204ENST00000438323 AQRO60306 1485 aaKnown RBP eCLIP23.95■■□□□ 1.42
IFI35-204ENST00000438323 EIF4G3O43432 1585 aaKnown RBP23.94■■□□□ 1.42
IFI35-204ENST00000438323 WRNQ14191 1432 aaPredicted RBP eCLIP23.89■■□□□ 1.41
IFI35-204ENST00000438323 SYNJ1O43426 1573 aa23.89■■□□□ 1.41
IFI35-204ENST00000438323 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.41
IFI35-204ENST00000438323 TOP2BQ02880 1626 aa23.88■■□□□ 1.41
IFI35-204ENST00000438323 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
IFI35-204ENST00000438323 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
IFI35-204ENST00000438323 WDR97A6NE52 1622 aa23.85■■□□□ 1.41
IFI35-204ENST00000438323 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
IFI35-204ENST00000438323 CHD1O14646 1710 aa23.78■■□□□ 1.4
IFI35-204ENST00000438323 ABCA5Q8WWZ7 1642 aa23.72■■□□□ 1.39
IFI35-204ENST00000438323 GAPVD1Q14C86 1478 aa23.7■■□□□ 1.38
IFI35-204ENST00000438323 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
IFI35-204ENST00000438323 SNAPC4Q5SXM2 1469 aa23.67■■□□□ 1.38
IFI35-204ENST00000438323 PBRM1Q86U86 1689 aa23.63■■□□□ 1.37
IFI35-204ENST00000438323 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
IFI35-204ENST00000438323 FBLN2P98095 1184 aa23.62■■□□□ 1.37
IFI35-204ENST00000438323 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
IFI35-204ENST00000438323 CHMP7Q8WUX9 453 aaPredicted RBP23.51■■□□□ 1.35
IFI35-204ENST00000438323 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
IFI35-204ENST00000438323 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
IFI35-204ENST00000438323 ADAMTS12P58397 1594 aa23.46■■□□□ 1.35
IFI35-204ENST00000438323 IGF1RP08069 1367 aa23.42■■□□□ 1.34
IFI35-204ENST00000438323 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
IFI35-204ENST00000438323 GRIN2AQ12879 1464 aa23.4■■□□□ 1.34
IFI35-204ENST00000438323 KIF27Q86VH2 1401 aa23.36■■□□□ 1.33
IFI35-204ENST00000438323 NUP160Q12769 1436 aa23.35■■□□□ 1.33
IFI35-204ENST00000438323 CEP170Q5SW79 1584 aa23.32■■□□□ 1.32
IFI35-204ENST00000438323 RUSC2Q8N2Y8 1516 aa23.29■■□□□ 1.32
IFI35-204ENST00000438323 CUL7Q14999 1698 aa23.21■■□□□ 1.31
IFI35-204ENST00000438323 CARMIL1Q5VZK9 1371 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms