Protein–RNA interactions for Protein: Q5VWM3

PRAMEF18, PRAME family member 18, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF18Q5VWM3 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 AC079414.2-201ENST00000567157 1104 ntBASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 KF455155.1-201ENST00000604493 303 ntBASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRAMEF18Q5VWM3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 SHMT1P1-201ENST00000419974 1312 ntBASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 LINC02486-201ENST00000604157 3000 ntBASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 SNORA57-201ENST00000383870 149 ntBASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 EEF1DP5-201ENST00000431410 772 ntBASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 AC092810.2-201ENST00000431570 362 ntBASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 RN7SL602P-201ENST00000578326 324 ntBASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 RN7SL718P-201ENST00000581254 303 ntBASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 MIR6074-201ENST00000612054 107 ntBASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 RN7SL832P-201ENST00000607781 1756 ntBASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF18Q5VWM3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 SIRPB3P-201ENST00000340424 1216 ntBASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 ACTBP14-201ENST00000411655 1089 ntBASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 HIST1H2APS2-201ENST00000454426 370 ntBASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 GPX3-202ENST00000517973 612 ntTSL 3 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF18Q5VWM3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms