Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.51□□□□□ -0.41
SFTPBP07988 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.51□□□□□ -0.41
SFTPBP07988 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.51□□□□□ -0.41
SFTPBP07988 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.51□□□□□ -0.41
SFTPBP07988 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.51□□□□□ -0.41
SFTPBP07988 AL033527.4-201ENST00000641026 673 ntBASIC12.51□□□□□ -0.41
SFTPBP07988 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.51□□□□□ -0.41
SFTPBP07988 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SFTPBP07988 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.51□□□□□ -0.41
SFTPBP07988 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SFTPBP07988 TCAM1P-207ENST00000485295 1537 ntBASIC12.51□□□□□ -0.41
SFTPBP07988 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.51□□□□□ -0.41
SFTPBP07988 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 KRT8P24-201ENST00000560290 1559 ntBASIC12.51□□□□□ -0.41
SFTPBP07988 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.51□□□□□ -0.41
SFTPBP07988 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SFTPBP07988 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
SFTPBP07988 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SFTPBP07988 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.51□□□□□ -0.41
SFTPBP07988 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SFTPBP07988 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SFTPBP07988 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.51□□□□□ -0.41
SFTPBP07988 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SFTPBP07988 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SFTPBP07988 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
SFTPBP07988 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.5□□□□□ -0.41
SFTPBP07988 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SFTPBP07988 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SFTPBP07988 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SFTPBP07988 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SFTPBP07988 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
SFTPBP07988 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SFTPBP07988 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.5□□□□□ -0.41
SFTPBP07988 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.5□□□□□ -0.41
SFTPBP07988 AC138951.2-201ENST00000623455 1161 ntBASIC12.5□□□□□ -0.41
SFTPBP07988 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SFTPBP07988 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.5□□□□□ -0.41
SFTPBP07988 AP000593.2-201ENST00000542775 1433 ntBASIC12.5□□□□□ -0.41
SFTPBP07988 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.5□□□□□ -0.41
SFTPBP07988 AL590440.2-201ENST00000641973 1595 ntBASIC12.5□□□□□ -0.41
SFTPBP07988 OR2I1P-208ENST00000641137 4948 ntBASIC12.5□□□□□ -0.41
SFTPBP07988 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.5□□□□□ -0.41
SFTPBP07988 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SFTPBP07988 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.5□□□□□ -0.41
SFTPBP07988 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
SFTPBP07988 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.5□□□□□ -0.41
SFTPBP07988 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.5□□□□□ -0.41
SFTPBP07988 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SFTPBP07988 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SFTPBP07988 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SFTPBP07988 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.5□□□□□ -0.41
SFTPBP07988 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SFTPBP07988 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.5□□□□□ -0.41
SFTPBP07988 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SFTPBP07988 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SFTPBP07988 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SFTPBP07988 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SFTPBP07988 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SFTPBP07988 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SFTPBP07988 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SFTPBP07988 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SFTPBP07988 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SFTPBP07988 AC019294.4-201ENST00000561777 2905 ntBASIC12.49□□□□□ -0.41
SFTPBP07988 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SFTPBP07988 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms