Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 CDC45-201ENST00000263201 1976 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 COL9A1-202ENST00000357250 4761 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 RPH3A-201ENST00000389385 4679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 RPGRIP1-213ENST00000557771 3870 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 SERPINA10-202ENST00000393096 2451 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 NRG1-212ENST00000521670 1769 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 WDR24-202ENST00000293883 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 SALL4P6-201ENST00000429385 1691 ntBASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 CELF4-203ENST00000420428 4052 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 AC129492.6-201ENST00000611383 1305 ntBASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 SYNPO2L-201ENST00000372873 4121 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
LINC01558Q9Y6Z2 CYP1A1-201ENST00000379727 2685 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 FAIM2-205ENST00000550890 2094 ntTSL 2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 NBPF1-204ENST00000432949 4176 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AC068299.1-201ENST00000624716 1749 ntBASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 APLF-201ENST00000303795 3847 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 LINC02228-202ENST00000641261 2489 ntBASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AC079465.1-201ENST00000416046 3361 ntTSL 2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AC015688.4-201ENST00000580780 1647 ntBASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 TPM3-223ENST00000611659 3149 ntTSL 3 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 SLC45A4-201ENST00000024061 3546 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 ZBTB20-212ENST00000474710 2757 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 STAT3-213ENST00000588969 2772 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AC010624.1-201ENST00000527209 1525 ntTSL 2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AC009078.3-201ENST00000624205 4084 ntBASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AC006015.1-201ENST00000429970 570 ntBASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 KRT18P34-201ENST00000488218 1270 ntBASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 SORD2P-201ENST00000558556 1069 ntBASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 MIR4758-201ENST00000577688 71 ntBASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AL031055.1-201ENST00000606362 631 ntBASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 BGN-201ENST00000331595 2402 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 ZNF304-204ENST00000598744 3331 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
LINC01558Q9Y6Z2 MAGEC3-201ENST00000298296 1932 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms