RNA–Protein interactions for RNA: ENST00000557771.5

RPGRIP1-213, Transcript of RPGR interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGRIP1, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-213ENST00000557771 NISCHQ9Y2I1 1504 aa19.44■□□□□ 0.7
RPGRIP1-213ENST00000557771 HRCP23327 699 aa19.19■□□□□ 0.66
RPGRIP1-213ENST00000557771 PPARGC1BQ86YN6 1023 aaKnown RBP19.14■□□□□ 0.65
RPGRIP1-213ENST00000557771 PELP1Q8IZL8 1130 aaKnown RBP19.13■□□□□ 0.65
RPGRIP1-213ENST00000557771 PCGF6Q9BYE7 350 aa19.1■□□□□ 0.65
RPGRIP1-213ENST00000557771 SUPT5HO00267 1087 aaKnown RBP18.9■□□□□ 0.62
RPGRIP1-213ENST00000557771 SHROOM4Q9ULL8 1493 aa18.69■□□□□ 0.58
RPGRIP1-213ENST00000557771 MYT1Q01538 1121 aa18.48■□□□□ 0.55
RPGRIP1-213ENST00000557771 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
RPGRIP1-213ENST00000557771 CHIC1Q5VXU3 224 aa18.09■□□□□ 0.49
RPGRIP1-213ENST00000557771 LOC105371045A0A1W2PR82 267 aa18.07■□□□□ 0.48
RPGRIP1-213ENST00000557771 TRIM26Q12899 539 aaPredicted RBP18.02■□□□□ 0.48
RPGRIP1-213ENST00000557771 GTF3C3Q9Y5Q9 886 aa18.02■□□□□ 0.47
RPGRIP1-213ENST00000557771 ZEB1P37275 1124 aaPredicted RBP18.01■□□□□ 0.47
RPGRIP1-213ENST00000557771 EHMT2Q96KQ7 1210 aa17.97■□□□□ 0.47
RPGRIP1-213ENST00000557771 MYO15BQ96JP2 1530 aa17.97■□□□□ 0.47
RPGRIP1-213ENST00000557771 CENPBP07199 599 aaPredicted RBP17.96■□□□□ 0.46
RPGRIP1-213ENST00000557771 ACIN1Q9UKV3 1341 aaKnown RBP17.91■□□□□ 0.46
RPGRIP1-213ENST00000557771 NEUROD1Q13562 356 aa17.91■□□□□ 0.46
RPGRIP1-213ENST00000557771 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
RPGRIP1-213ENST00000557771 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.44
RPGRIP1-213ENST00000557771 FAM9AQ8IZU1 332 aaPredicted RBP17.67■□□□□ 0.42
RPGRIP1-213ENST00000557771 CCER1Q8TC90 406 aaPredicted RBP17.66■□□□□ 0.42
RPGRIP1-213ENST00000557771 DIEXFQ68CQ4 756 aaKnown RBP17.6■□□□□ 0.41
RPGRIP1-213ENST00000557771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
RPGRIP1-213ENST00000557771 TTBK1Q5TCY1 1321 aaPredicted RBP17.55■□□□□ 0.4
RPGRIP1-213ENST00000557771 DCAF1Q9Y4B6 1507 aa17.53■□□□□ 0.4
RPGRIP1-213ENST00000557771 BCL11AQ9H165 835 aa17.4■□□□□ 0.38
RPGRIP1-213ENST00000557771 CCDC180Q9P1Z9 1646 aa17.27■□□□□ 0.36
RPGRIP1-213ENST00000557771 TRIM41Q8WV44 630 aa17.22■□□□□ 0.35
RPGRIP1-213ENST00000557771 PRKCSHP14314 528 aaPredicted RBP17.2■□□□□ 0.34
RPGRIP1-213ENST00000557771 ANP32EQ9BTT0 268 aa17.11■□□□□ 0.33
RPGRIP1-213ENST00000557771 BCANQ96GW7 911 aa17.04■□□□□ 0.32
RPGRIP1-213ENST00000557771 ZNF316A6NFI3 1004 aaPredicted RBP17.04■□□□□ 0.32
RPGRIP1-213ENST00000557771 MIER1Q8N108 512 aa17.04■□□□□ 0.32
RPGRIP1-213ENST00000557771 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.31
RPGRIP1-213ENST00000557771 ERICH6Q7L0X2 663 aa16.94■□□□□ 0.3
RPGRIP1-213ENST00000557771 SUPT16HQ9Y5B9 1047 aaKnown RBP16.83■□□□□ 0.28
RPGRIP1-213ENST00000557771 TSHZ2Q9NRE2 1034 aa16.82■□□□□ 0.28
RPGRIP1-213ENST00000557771 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
RPGRIP1-213ENST00000557771 NEFLP07196 543 aa16.7■□□□□ 0.26
RPGRIP1-213ENST00000557771 FKBP8Q14318 412 aa16.64■□□□□ 0.25
RPGRIP1-213ENST00000557771 ITGAEP38570 1179 aa16.62■□□□□ 0.25
RPGRIP1-213ENST00000557771 RANGAP1P46060 587 aaPredicted RBP16.53■□□□□ 0.24
RPGRIP1-213ENST00000557771 UBTFP17480 764 aaKnown RBP16.53■□□□□ 0.24
RPGRIP1-213ENST00000557771 CLSPNQ9HAW4 1339 aa16.52■□□□□ 0.24
RPGRIP1-213ENST00000557771 RBM19Q9Y4C8 960 aaKnown RBP16.51■□□□□ 0.23
RPGRIP1-213ENST00000557771 ZCCHC6Q5VYS8 1495 aaKnown RBP16.45■□□□□ 0.22
RPGRIP1-213ENST00000557771 APLP2Q06481 763 aa16.45■□□□□ 0.22
RPGRIP1-213ENST00000557771 NBR1Q14596 966 aa16.39■□□□□ 0.21
RPGRIP1-213ENST00000557771 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
RPGRIP1-213ENST00000557771 DEKP35659 375 aaKnown RBP16.34■□□□□ 0.21
RPGRIP1-213ENST00000557771 CCDC136Q96JN2 1154 aa16.34■□□□□ 0.21
RPGRIP1-213ENST00000557771 TRIM52Q96A61 297 aa16.33■□□□□ 0.2
RPGRIP1-213ENST00000557771 RTN4Q9NQC3 1192 aaKnown RBP16.33■□□□□ 0.2
RPGRIP1-213ENST00000557771 KCNH8Q96L42 1107 aa16.32■□□□□ 0.2
RPGRIP1-213ENST00000557771 CDK11AQ9UQ88 783 aaPredicted RBP16.32■□□□□ 0.2
RPGRIP1-213ENST00000557771 IRX6P78412 446 aaPredicted RBP16.31■□□□□ 0.2
RPGRIP1-213ENST00000557771 RTL5Q5HYW3 569 aaPredicted RBP16.24■□□□□ 0.19
RPGRIP1-213ENST00000557771 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.24■□□□□ 0.19
RPGRIP1-213ENST00000557771 EIF5BO60841 1220 aaKnown RBP16.22■□□□□ 0.19
RPGRIP1-213ENST00000557771 MSH5O43196 834 aa16.21■□□□□ 0.19
RPGRIP1-213ENST00000557771 DDX10Q13206 875 aaKnown RBP16.19■□□□□ 0.18
RPGRIP1-213ENST00000557771 SALL2Q9Y467 1007 aaPredicted RBP16.16■□□□□ 0.18
RPGRIP1-213ENST00000557771 MYT1LQ9UL68 1186 aa16.11■□□□□ 0.17
RPGRIP1-213ENST00000557771 HIRIP3Q9BW71 556 aaPredicted RBP16.09■□□□□ 0.17
RPGRIP1-213ENST00000557771 CEP162Q5TB80 1403 aa16.05■□□□□ 0.16
RPGRIP1-213ENST00000557771 ANP32CO43423 234 aa16.02■□□□□ 0.16
RPGRIP1-213ENST00000557771 HNRNPUQ00839 825 aaKnown RBP eCLIP15.99■□□□□ 0.15
RPGRIP1-213ENST00000557771 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
RPGRIP1-213ENST00000557771 IL27Q8NEV9 243 aa15.96■□□□□ 0.15
RPGRIP1-213ENST00000557771 NOP58Q9Y2X3 529 aaKnown RBP15.96■□□□□ 0.15
RPGRIP1-213ENST00000557771 CNGB1Q14028 1251 aaPredicted RBP15.95■□□□□ 0.14
RPGRIP1-213ENST00000557771 NPM2Q86SE8 214 aaKnown RBP15.95■□□□□ 0.14
RPGRIP1-213ENST00000557771 FANCIQ9NVI1 1328 aa15.94■□□□□ 0.14
RPGRIP1-213ENST00000557771 SLC24A1O60721 1099 aa15.93■□□□□ 0.14
RPGRIP1-213ENST00000557771 RB1CC1Q8TDY2 1594 aa15.93■□□□□ 0.14
RPGRIP1-213ENST00000557771 ANP32AP39687 249 aaKnown RBP15.92■□□□□ 0.14
RPGRIP1-213ENST00000557771 B4GALNT3Q6L9W6 998 aa15.91■□□□□ 0.14
RPGRIP1-213ENST00000557771 ZBTB47Q9UFB7 747 aaPredicted RBP15.88■□□□□ 0.13
RPGRIP1-213ENST00000557771 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
RPGRIP1-213ENST00000557771 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
RPGRIP1-213ENST00000557771 LAS1LQ9Y4W2 734 aaKnown RBP15.83■□□□□ 0.12
RPGRIP1-213ENST00000557771 ERICH6BQ5W0A0 696 aa15.81■□□□□ 0.12
RPGRIP1-213ENST00000557771 WRNQ14191 1432 aaPredicted RBP eCLIP15.78■□□□□ 0.12
RPGRIP1-213ENST00000557771 TNIKQ9UKE5 1360 aa15.76■□□□□ 0.11
RPGRIP1-213ENST00000557771 SENP3-EIF4A1A0A087X0R7 540 aa15.76■□□□□ 0.11
RPGRIP1-213ENST00000557771 PPP4R2Q9NY27 417 aa15.76■□□□□ 0.11
RPGRIP1-213ENST00000557771 NEFMP07197 916 aa15.74■□□□□ 0.11
RPGRIP1-213ENST00000557771 FAM9BQ8IZU0 186 aa15.74■□□□□ 0.11
RPGRIP1-213ENST00000557771 SIN3AQ96ST3 1273 aa15.72■□□□□ 0.11
RPGRIP1-213ENST00000557771 ATP1B4Q9UN42 357 aaPredicted RBP15.72■□□□□ 0.11
RPGRIP1-213ENST00000557771 SOGA1O94964 1423 aa15.72■□□□□ 0.11
RPGRIP1-213ENST00000557771 DHX57Q6P158 1386 aaKnown RBP15.72■□□□□ 0.11
RPGRIP1-213ENST00000557771 TIMELESSQ9UNS1 1208 aa15.7■□□□□ 0.1
RPGRIP1-213ENST00000557771 DAXXQ9UER7 740 aaPredicted RBP15.68■□□□□ 0.1
RPGRIP1-213ENST00000557771 UBE2Q2Q8WVN8 375 aa15.68■□□□□ 0.1
RPGRIP1-213ENST00000557771 CLIP1P30622 1438 aa15.66■□□□□ 0.1
RPGRIP1-213ENST00000557771 FAM50AQ14320 339 aaKnown RBP15.66■□□□□ 0.1
RPGRIP1-213ENST00000557771 SCRIBQ14160 1630 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms