RNA–Protein interactions for RNA: ENST00000055682.10

NEXMIF-201, Transcript of neurite extension and migration factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEXMIF, Length 11,719 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEXMIF-201ENST00000055682 DCAF8L2P0C7V8 631 aa18.89■□□□□ 0.62
NEXMIF-201ENST00000055682 PELP1Q8IZL8 1130 aaKnown RBP18.86■□□□□ 0.61
NEXMIF-201ENST00000055682 CCER1Q8TC90 406 aaPredicted RBP17.99■□□□□ 0.47
NEXMIF-201ENST00000055682 FAM9AQ8IZU1 332 aaPredicted RBP17.91■□□□□ 0.46
NEXMIF-201ENST00000055682 APLP2Q06481 763 aa17.89■□□□□ 0.45
NEXMIF-201ENST00000055682 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.45
NEXMIF-201ENST00000055682 ERICH6Q7L0X2 663 aa17.89■□□□□ 0.45
NEXMIF-201ENST00000055682 MYT1Q01538 1121 aa17.69■□□□□ 0.42
NEXMIF-201ENST00000055682 CENPBP07199 599 aaPredicted RBP17.6■□□□□ 0.41
NEXMIF-201ENST00000055682 EHMT2Q96KQ7 1210 aa17.41■□□□□ 0.38
NEXMIF-201ENST00000055682 ZEB1P37275 1124 aaPredicted RBP17.37■□□□□ 0.37
NEXMIF-201ENST00000055682 NEFLP07196 543 aa17.33■□□□□ 0.37
NEXMIF-201ENST00000055682 YTHDC1Q96MU7 727 aaKnown RBP17.28■□□□□ 0.36
NEXMIF-201ENST00000055682 SHROOM4Q9ULL8 1493 aa17.23■□□□□ 0.35
NEXMIF-201ENST00000055682 PCGF6Q9BYE7 350 aa17.12■□□□□ 0.33
NEXMIF-201ENST00000055682 DAXXQ9UER7 740 aaPredicted RBP17.11■□□□□ 0.33
NEXMIF-201ENST00000055682 NISCHQ9Y2I1 1504 aa17.05■□□□□ 0.32
NEXMIF-201ENST00000055682 TTBK1Q5TCY1 1321 aaPredicted RBP16.93■□□□□ 0.3
NEXMIF-201ENST00000055682 ATP1B4Q9UN42 357 aaPredicted RBP16.91■□□□□ 0.3
NEXMIF-201ENST00000055682 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
NEXMIF-201ENST00000055682 RANGAP1P46060 587 aaPredicted RBP16.72■□□□□ 0.27
NEXMIF-201ENST00000055682 UBTFP17480 764 aaKnown RBP16.7■□□□□ 0.26
NEXMIF-201ENST00000055682 RTL5Q5HYW3 569 aaPredicted RBP16.61■□□□□ 0.25
NEXMIF-201ENST00000055682 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
NEXMIF-201ENST00000055682 MYT1LQ9UL68 1186 aa16.47■□□□□ 0.23
NEXMIF-201ENST00000055682 CLSPNQ9HAW4 1339 aa16.46■□□□□ 0.23
NEXMIF-201ENST00000055682 POLR3GLQ9BT43 218 aa16.39■□□□□ 0.21
NEXMIF-201ENST00000055682 TRIM26Q12899 539 aaPredicted RBP16.38■□□□□ 0.21
NEXMIF-201ENST00000055682 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
NEXMIF-201ENST00000055682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.26■□□□□ 0.19
NEXMIF-201ENST00000055682 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
NEXMIF-201ENST00000055682 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
NEXMIF-201ENST00000055682 HRCP23327 699 aa16.17■□□□□ 0.18
NEXMIF-201ENST00000055682 ITGAEP38570 1179 aa16.14■□□□□ 0.17
NEXMIF-201ENST00000055682 CDK11AQ9UQ88 783 aaPredicted RBP16.05■□□□□ 0.16
NEXMIF-201ENST00000055682 CNGB1Q14028 1251 aaPredicted RBP16.04■□□□□ 0.16
NEXMIF-201ENST00000055682 PPARGC1BQ86YN6 1023 aaKnown RBP16.02■□□□□ 0.16
NEXMIF-201ENST00000055682 ANP32BQ92688 251 aaKnown RBP16.01■□□□□ 0.15
NEXMIF-201ENST00000055682 CHIC1Q5VXU3 224 aa16.01■□□□□ 0.15
NEXMIF-201ENST00000055682 DIEXFQ68CQ4 756 aaKnown RBP15.99■□□□□ 0.15
NEXMIF-201ENST00000055682 NEFMP07197 916 aa15.98■□□□□ 0.15
NEXMIF-201ENST00000055682 GLIPR1L2Q4G1C9 344 aa15.95■□□□□ 0.14
NEXMIF-201ENST00000055682 CANXP27824 592 aaKnown RBP15.89■□□□□ 0.13
NEXMIF-201ENST00000055682 ANP32CO43423 234 aa15.89■□□□□ 0.13
NEXMIF-201ENST00000055682 ANP32AP39687 249 aaKnown RBP15.88■□□□□ 0.13
NEXMIF-201ENST00000055682 SLC24A1O60721 1099 aa15.83■□□□□ 0.13
NEXMIF-201ENST00000055682 TRIM52Q96A61 297 aa15.79■□□□□ 0.12
NEXMIF-201ENST00000055682 FAM50AQ14320 339 aaKnown RBP15.77■□□□□ 0.12
NEXMIF-201ENST00000055682 HSP90AA1P07900 732 aaKnown RBP15.75■□□□□ 0.11
NEXMIF-201ENST00000055682 UPF2Q9HAU5 1272 aaKnown RBP15.75■□□□□ 0.11
NEXMIF-201ENST00000055682 EIF5BO60841 1220 aaKnown RBP15.67■□□□□ 0.1
NEXMIF-201ENST00000055682 NEUROD1Q13562 356 aa15.64■□□□□ 0.1
NEXMIF-201ENST00000055682 CDK11BP21127 795 aaKnown RBP15.63■□□□□ 0.09
NEXMIF-201ENST00000055682 GTF3C3Q9Y5Q9 886 aa15.62■□□□□ 0.09
NEXMIF-201ENST00000055682 BCANQ96GW7 911 aa15.62■□□□□ 0.09
NEXMIF-201ENST00000055682 BCL11AQ9H165 835 aa15.61■□□□□ 0.09
NEXMIF-201ENST00000055682 ZNF326Q5BKZ1 582 aaKnown RBP15.57■□□□□ 0.08
NEXMIF-201ENST00000055682 LOC105371045A0A1W2PR82 267 aa15.54■□□□□ 0.08
NEXMIF-201ENST00000055682 NPM2Q86SE8 214 aaKnown RBP15.48■□□□□ 0.07
NEXMIF-201ENST00000055682 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.46■□□□□ 0.06
NEXMIF-201ENST00000055682 TNNT2P45379 298 aaPredicted RBP15.43■□□□□ 0.06
NEXMIF-201ENST00000055682 ANP32EQ9BTT0 268 aa15.43■□□□□ 0.06
NEXMIF-201ENST00000055682 ESF1Q9H501 851 aaKnown RBP15.41■□□□□ 0.06
NEXMIF-201ENST00000055682 TRIM44Q96DX7 344 aaPredicted RBP15.33■□□□□ 0.05
NEXMIF-201ENST00000055682 MYH16Q9H6N6 1097 aa15.32■□□□□ 0.04
NEXMIF-201ENST00000055682 ACIN1Q9UKV3 1341 aaKnown RBP15.31■□□□□ 0.04
NEXMIF-201ENST00000055682 NCLP19338 710 aaKnown RBP15.31■□□□□ 0.04
NEXMIF-201ENST00000055682 STAG3Q9UJ98 1225 aa15.29■□□□□ 0.04
NEXMIF-201ENST00000055682 GOLGA6L22H0YM25 854 aa15.27■□□□□ 0.04
NEXMIF-201ENST00000055682 BECN1Q14457 450 aa15.27■□□□□ 0.03
NEXMIF-201ENST00000055682 CCDC136Q96JN2 1154 aa15.26■□□□□ 0.03
NEXMIF-201ENST00000055682 FKBP8Q14318 412 aa15.25■□□□□ 0.03
NEXMIF-201ENST00000055682 ZRSR1Q15695 479 aaKnown RBP15.25■□□□□ 0.03
NEXMIF-201ENST00000055682 FBLN2P98095 1184 aa15.24■□□□□ 0.03
NEXMIF-201ENST00000055682 TONSLQ96HA7 1378 aa15.24■□□□□ 0.03
NEXMIF-201ENST00000055682 DDRGK1Q96HY6 314 aa15.23■□□□□ 0.03
NEXMIF-201ENST00000055682 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
NEXMIF-201ENST00000055682 WDR43Q15061 677 aaKnown RBP eCLIP15.21■□□□□ 0.03
NEXMIF-201ENST00000055682 HNRNPUQ00839 825 aaKnown RBP eCLIP15.21■□□□□ 0.03
NEXMIF-201ENST00000055682 NBR1Q14596 966 aa15.17■□□□□ 0.02
NEXMIF-201ENST00000055682 CASC1Q6TDU7 716 aa15.13■□□□□ 0.01
NEXMIF-201ENST00000055682 ARXQ96QS3 562 aa15.13■□□□□ 0.01
NEXMIF-201ENST00000055682 ZNF777Q9ULD5 760 aaPredicted RBP15.12■□□□□ 0.01
NEXMIF-201ENST00000055682 FAM9BQ8IZU0 186 aa15.11■□□□□ 0.01
NEXMIF-201ENST00000055682 DNTTIP2Q5QJE6 756 aaKnown RBP15.11■□□□□ 0.01
NEXMIF-201ENST00000055682 CHGAP10645 457 aaKnown RBP15.1■□□□□ 0.01
NEXMIF-201ENST00000055682 GOLGA6L6A8MZA4 724 aa15.1■□□□□ 0.01
NEXMIF-201ENST00000055682 PTMAP06454 111 aaKnown RBP15.08■□□□□ 0.01
NEXMIF-201ENST00000055682 NRDCO43847 1150 aa15.08■□□□□ 0
NEXMIF-201ENST00000055682 ERICH6BQ5W0A0 696 aa15.08■□□□□ 0
NEXMIF-201ENST00000055682 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
NEXMIF-201ENST00000055682 L1TD1Q5T7N2 865 aaKnown RBP15.01□□□□□ -0.01
NEXMIF-201ENST00000055682 SALL2Q9Y467 1007 aaPredicted RBP15.01□□□□□ -0.01
NEXMIF-201ENST00000055682 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
NEXMIF-201ENST00000055682 DDX10Q13206 875 aaKnown RBP14.96□□□□□ -0.01
NEXMIF-201ENST00000055682 CHAF1AQ13111 956 aaPredicted RBP14.96□□□□□ -0.01
NEXMIF-201ENST00000055682 CHMP4BQ9H444 224 aaKnown RBP14.96□□□□□ -0.01
NEXMIF-201ENST00000055682 MRS2Q9HD23 443 aa14.95□□□□□ -0.02
NEXMIF-201ENST00000055682 PPM1GO15355 546 aaPredicted RBP14.95□□□□□ -0.02
NEXMIF-201ENST00000055682 P3H3Q8IVL6 736 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms