RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 DCAF8L2P0C7V8 631 aa19.84■□□□□ 0.77
RIMKLA-202ENST00000431473 SUPT5HO00267 1087 aaKnown RBP19.08■□□□□ 0.65
RIMKLA-202ENST00000431473 EHMT2Q96KQ7 1210 aa18.85■□□□□ 0.61
RIMKLA-202ENST00000431473 PELP1Q8IZL8 1130 aaKnown RBP18.81■□□□□ 0.6
RIMKLA-202ENST00000431473 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
RIMKLA-202ENST00000431473 NISCHQ9Y2I1 1504 aa18.35■□□□□ 0.53
RIMKLA-202ENST00000431473 PCGF6Q9BYE7 350 aa18.28■□□□□ 0.52
RIMKLA-202ENST00000431473 TTBK1Q5TCY1 1321 aaPredicted RBP18.27■□□□□ 0.51
RIMKLA-202ENST00000431473 APLP2Q06481 763 aa18.21■□□□□ 0.51
RIMKLA-202ENST00000431473 ERICH6Q7L0X2 663 aa18.19■□□□□ 0.5
RIMKLA-202ENST00000431473 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.49
RIMKLA-202ENST00000431473 CENPBP07199 599 aaPredicted RBP18.06■□□□□ 0.48
RIMKLA-202ENST00000431473 CCER1Q8TC90 406 aaPredicted RBP17.94■□□□□ 0.46
RIMKLA-202ENST00000431473 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
RIMKLA-202ENST00000431473 RANGAP1P46060 587 aaPredicted RBP17.85■□□□□ 0.45
RIMKLA-202ENST00000431473 ZEB1P37275 1124 aaPredicted RBP17.81■□□□□ 0.44
RIMKLA-202ENST00000431473 MYT1Q01538 1121 aa17.75■□□□□ 0.43
RIMKLA-202ENST00000431473 NEFLP07196 543 aa17.67■□□□□ 0.42
RIMKLA-202ENST00000431473 ATP1B4Q9UN42 357 aaPredicted RBP17.62■□□□□ 0.41
RIMKLA-202ENST00000431473 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
RIMKLA-202ENST00000431473 PPARGC1BQ86YN6 1023 aaKnown RBP17.5■□□□□ 0.39
RIMKLA-202ENST00000431473 UBTFP17480 764 aaKnown RBP17.44■□□□□ 0.38
RIMKLA-202ENST00000431473 DAXXQ9UER7 740 aaPredicted RBP17.29■□□□□ 0.36
RIMKLA-202ENST00000431473 TRIM26Q12899 539 aaPredicted RBP17.25■□□□□ 0.35
RIMKLA-202ENST00000431473 HRCP23327 699 aa17.23■□□□□ 0.35
RIMKLA-202ENST00000431473 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
RIMKLA-202ENST00000431473 ITGAEP38570 1179 aa17.09■□□□□ 0.33
RIMKLA-202ENST00000431473 CNGB1Q14028 1251 aaPredicted RBP17.09■□□□□ 0.33
RIMKLA-202ENST00000431473 LOC105371045A0A1W2PR82 267 aa16.98■□□□□ 0.31
RIMKLA-202ENST00000431473 HNRNPUL2Q1KMD3 747 aaKnown RBP16.94■□□□□ 0.3
RIMKLA-202ENST00000431473 RTL5Q5HYW3 569 aaPredicted RBP16.94■□□□□ 0.3
RIMKLA-202ENST00000431473 ZNF316A6NFI3 1004 aaPredicted RBP16.92■□□□□ 0.3
RIMKLA-202ENST00000431473 DIEXFQ68CQ4 756 aaKnown RBP16.91■□□□□ 0.3
RIMKLA-202ENST00000431473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.87■□□□□ 0.29
RIMKLA-202ENST00000431473 MYT1LQ9UL68 1186 aa16.82■□□□□ 0.28
RIMKLA-202ENST00000431473 CLSPNQ9HAW4 1339 aa16.81■□□□□ 0.28
RIMKLA-202ENST00000431473 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.28
RIMKLA-202ENST00000431473 SLC4A1APQ9BWU0 796 aaKnown RBP16.77■□□□□ 0.27
RIMKLA-202ENST00000431473 BCANQ96GW7 911 aa16.76■□□□□ 0.27
RIMKLA-202ENST00000431473 GTF3C3Q9Y5Q9 886 aa16.74■□□□□ 0.27
RIMKLA-202ENST00000431473 NEUROD1Q13562 356 aa16.56■□□□□ 0.24
RIMKLA-202ENST00000431473 CDK11AQ9UQ88 783 aaPredicted RBP16.55■□□□□ 0.24
RIMKLA-202ENST00000431473 FAM50AQ14320 339 aaKnown RBP16.54■□□□□ 0.24
RIMKLA-202ENST00000431473 BCL11AQ9H165 835 aa16.44■□□□□ 0.22
RIMKLA-202ENST00000431473 ANP32CO43423 234 aa16.44■□□□□ 0.22
RIMKLA-202ENST00000431473 TRIM52Q96A61 297 aa16.43■□□□□ 0.22
RIMKLA-202ENST00000431473 ZNF326Q5BKZ1 582 aaKnown RBP16.38■□□□□ 0.21
RIMKLA-202ENST00000431473 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
RIMKLA-202ENST00000431473 EIF5BO60841 1220 aaKnown RBP16.32■□□□□ 0.2
RIMKLA-202ENST00000431473 ANP32AP39687 249 aaKnown RBP16.31■□□□□ 0.2
RIMKLA-202ENST00000431473 NPM2Q86SE8 214 aaKnown RBP16.31■□□□□ 0.2
RIMKLA-202ENST00000431473 ZBTB47Q9UFB7 747 aaPredicted RBP16.31■□□□□ 0.2
RIMKLA-202ENST00000431473 CANXP27824 592 aaKnown RBP16.31■□□□□ 0.2
RIMKLA-202ENST00000431473 SLC24A1O60721 1099 aa16.25■□□□□ 0.19
RIMKLA-202ENST00000431473 FKBP8Q14318 412 aa16.15■□□□□ 0.18
RIMKLA-202ENST00000431473 NBR1Q14596 966 aa16.12■□□□□ 0.17
RIMKLA-202ENST00000431473 ANP32BQ92688 251 aaKnown RBP16.08■□□□□ 0.16
RIMKLA-202ENST00000431473 HSP90AA1P07900 732 aaKnown RBP16.06■□□□□ 0.16
RIMKLA-202ENST00000431473 ARXQ96QS3 562 aa16.04■□□□□ 0.16
RIMKLA-202ENST00000431473 NEFMP07197 916 aa16■□□□□ 0.15
RIMKLA-202ENST00000431473 GLIPR1L2Q4G1C9 344 aa16■□□□□ 0.15
RIMKLA-202ENST00000431473 ARID3CA6NKF2 412 aa15.98■□□□□ 0.15
RIMKLA-202ENST00000431473 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
RIMKLA-202ENST00000431473 P3H3Q8IVL6 736 aa15.95■□□□□ 0.14
RIMKLA-202ENST00000431473 FAM9BQ8IZU0 186 aa15.94■□□□□ 0.14
RIMKLA-202ENST00000431473 SALL2Q9Y467 1007 aaPredicted RBP15.93■□□□□ 0.14
RIMKLA-202ENST00000431473 UPF2Q9HAU5 1272 aaKnown RBP15.93■□□□□ 0.14
RIMKLA-202ENST00000431473 SCAF1Q9H7N4 1312 aaKnown RBP15.93■□□□□ 0.14
RIMKLA-202ENST00000431473 FBLN2P98095 1184 aa15.9■□□□□ 0.14
RIMKLA-202ENST00000431473 PABPN1Q86U42 306 aaKnown RBP eCLIP15.9■□□□□ 0.14
RIMKLA-202ENST00000431473 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
RIMKLA-202ENST00000431473 CCDC136Q96JN2 1154 aa15.86■□□□□ 0.13
RIMKLA-202ENST00000431473 IRX6P78412 446 aaPredicted RBP15.85■□□□□ 0.13
RIMKLA-202ENST00000431473 TONSLQ96HA7 1378 aa15.85■□□□□ 0.13
RIMKLA-202ENST00000431473 ZNF777Q9ULD5 760 aaPredicted RBP15.84■□□□□ 0.13
RIMKLA-202ENST00000431473 ABCC9O60706 1549 aa15.79■□□□□ 0.12
RIMKLA-202ENST00000431473 DCAF1Q9Y4B6 1507 aa15.77■□□□□ 0.11
RIMKLA-202ENST00000431473 TMC1Q8TDI8 760 aa15.74■□□□□ 0.11
RIMKLA-202ENST00000431473 MIER1Q8N108 512 aa15.73■□□□□ 0.11
RIMKLA-202ENST00000431473 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.69■□□□□ 0.1
RIMKLA-202ENST00000431473 SCRIBQ14160 1630 aa15.69■□□□□ 0.1
RIMKLA-202ENST00000431473 HIRIP3Q9BW71 556 aaPredicted RBP15.69■□□□□ 0.1
RIMKLA-202ENST00000431473 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
RIMKLA-202ENST00000431473 MRS2Q9HD23 443 aa15.66■□□□□ 0.1
RIMKLA-202ENST00000431473 CHGAP10645 457 aaKnown RBP15.65■□□□□ 0.1
RIMKLA-202ENST00000431473 WDR43Q15061 677 aaKnown RBP eCLIP15.63■□□□□ 0.09
RIMKLA-202ENST00000431473 TRIM44Q96DX7 344 aaPredicted RBP15.61■□□□□ 0.09
RIMKLA-202ENST00000431473 CHIC2Q9UKJ5 165 aa15.6■□□□□ 0.09
RIMKLA-202ENST00000431473 PLPPR3Q6T4P5 718 aa15.59■□□□□ 0.09
RIMKLA-202ENST00000431473 RTN4Q9NQC3 1192 aaKnown RBP15.59■□□□□ 0.09
RIMKLA-202ENST00000431473 CCDC180Q9P1Z9 1646 aa15.58■□□□□ 0.08
RIMKLA-202ENST00000431473 STAG3Q9UJ98 1225 aa15.57■□□□□ 0.08
RIMKLA-202ENST00000431473 KDM2AQ9Y2K7 1162 aa15.57■□□□□ 0.08
RIMKLA-202ENST00000431473 SENP3-EIF4A1A0A087X0R7 540 aa15.57■□□□□ 0.08
RIMKLA-202ENST00000431473 ANP32EQ9BTT0 268 aa15.56■□□□□ 0.08
RIMKLA-202ENST00000431473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.56■□□□□ 0.08
RIMKLA-202ENST00000431473 DDRGK1Q96HY6 314 aa15.55■□□□□ 0.08
RIMKLA-202ENST00000431473 BECN1Q14457 450 aa15.54■□□□□ 0.08
RIMKLA-202ENST00000431473 MYH16Q9H6N6 1097 aa15.53■□□□□ 0.08
RIMKLA-202ENST00000431473 TPRNQ4KMQ1 711 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms