RNA–Protein interactions for RNA: ENST00000420428.6

CELF4-203, Transcript of CUGBP Elav-like family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CELF4, Length 4,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-203ENST00000420428 NISCHQ9Y2I1 1504 aa22.42■■□□□ 1.18
CELF4-203ENST00000420428 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
CELF4-203ENST00000420428 SUPT5HO00267 1087 aaKnown RBP20.78■□□□□ 0.92
CELF4-203ENST00000420428 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
CELF4-203ENST00000420428 PCGF6Q9BYE7 350 aa20.09■□□□□ 0.81
CELF4-203ENST00000420428 HRCP23327 699 aa19.82■□□□□ 0.76
CELF4-203ENST00000420428 PPARGC1BQ86YN6 1023 aaKnown RBP19.79■□□□□ 0.76
CELF4-203ENST00000420428 EHMT2Q96KQ7 1210 aa19.68■□□□□ 0.74
CELF4-203ENST00000420428 CHIC1Q5VXU3 224 aa19.66■□□□□ 0.74
CELF4-203ENST00000420428 LOC105371045A0A1W2PR82 267 aa19.55■□□□□ 0.72
CELF4-203ENST00000420428 ABCC9O60706 1549 aa19.44■□□□□ 0.7
CELF4-203ENST00000420428 FAM9AQ8IZU1 332 aaPredicted RBP19.41■□□□□ 0.7
CELF4-203ENST00000420428 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
CELF4-203ENST00000420428 TRIM26Q12899 539 aaPredicted RBP19.15■□□□□ 0.66
CELF4-203ENST00000420428 TTBK1Q5TCY1 1321 aaPredicted RBP19.07■□□□□ 0.64
CELF4-203ENST00000420428 TRIM41Q8WV44 630 aa19.04■□□□□ 0.64
CELF4-203ENST00000420428 ZEB1P37275 1124 aaPredicted RBP18.9■□□□□ 0.62
CELF4-203ENST00000420428 CCDC180Q9P1Z9 1646 aa18.9■□□□□ 0.62
CELF4-203ENST00000420428 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
CELF4-203ENST00000420428 CCER1Q8TC90 406 aaPredicted RBP18.81■□□□□ 0.6
CELF4-203ENST00000420428 PELP1Q8IZL8 1130 aaKnown RBP18.74■□□□□ 0.59
CELF4-203ENST00000420428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
CELF4-203ENST00000420428 DCAF1Q9Y4B6 1507 aa18.7■□□□□ 0.58
CELF4-203ENST00000420428 SCAF1Q9H7N4 1312 aaKnown RBP18.63■□□□□ 0.57
CELF4-203ENST00000420428 YTHDC1Q96MU7 727 aaKnown RBP18.59■□□□□ 0.57
CELF4-203ENST00000420428 CENPBP07199 599 aaPredicted RBP18.52■□□□□ 0.56
CELF4-203ENST00000420428 GTF3C3Q9Y5Q9 886 aa18.43■□□□□ 0.54
CELF4-203ENST00000420428 DIEXFQ68CQ4 756 aaKnown RBP18.42■□□□□ 0.54
CELF4-203ENST00000420428 RANGAP1P46060 587 aaPredicted RBP18.4■□□□□ 0.54
CELF4-203ENST00000420428 NEUROD1Q13562 356 aa18.37■□□□□ 0.53
CELF4-203ENST00000420428 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
CELF4-203ENST00000420428 ACIN1Q9UKV3 1341 aaKnown RBP18.34■□□□□ 0.53
CELF4-203ENST00000420428 UBTFP17480 764 aaKnown RBP18.34■□□□□ 0.53
CELF4-203ENST00000420428 RB1CC1Q8TDY2 1594 aa18.31■□□□□ 0.52
CELF4-203ENST00000420428 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
CELF4-203ENST00000420428 APLP2Q06481 763 aa18.14■□□□□ 0.49
CELF4-203ENST00000420428 RSF1Q96T23 1441 aaPredicted RBP18.13■□□□□ 0.49
CELF4-203ENST00000420428 SCRIBQ14160 1630 aa18.13■□□□□ 0.49
CELF4-203ENST00000420428 NACADO15069 1562 aa18.11■□□□□ 0.49
CELF4-203ENST00000420428 ZNF316A6NFI3 1004 aaPredicted RBP18■□□□□ 0.47
CELF4-203ENST00000420428 MYT1Q01538 1121 aa17.89■□□□□ 0.46
CELF4-203ENST00000420428 MIER1Q8N108 512 aa17.89■□□□□ 0.45
CELF4-203ENST00000420428 DNAJC5BQ9UF47 199 aa17.87■□□□□ 0.45
CELF4-203ENST00000420428 ITGAEP38570 1179 aa17.85■□□□□ 0.45
CELF4-203ENST00000420428 CECR2Q9BXF3 1484 aa17.82■□□□□ 0.44
CELF4-203ENST00000420428 CSRNP3Q8WYN3 585 aa17.79■□□□□ 0.44
CELF4-203ENST00000420428 BCANQ96GW7 911 aa17.7■□□□□ 0.42
CELF4-203ENST00000420428 CEP162Q5TB80 1403 aa17.68■□□□□ 0.42
CELF4-203ENST00000420428 ATP1B4Q9UN42 357 aaPredicted RBP17.63■□□□□ 0.41
CELF4-203ENST00000420428 MROH2BQ7Z745 1585 aa17.62■□□□□ 0.41
CELF4-203ENST00000420428 SOGA1O94964 1423 aa17.59■□□□□ 0.41
CELF4-203ENST00000420428 ABCC8Q09428 1581 aa17.55■□□□□ 0.4
CELF4-203ENST00000420428 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
CELF4-203ENST00000420428 WIZO95785 1651 aa17.5■□□□□ 0.39
CELF4-203ENST00000420428 NEFLP07196 543 aa17.47■□□□□ 0.39
CELF4-203ENST00000420428 TNIKQ9UKE5 1360 aa17.45■□□□□ 0.38
CELF4-203ENST00000420428 RUSC2Q8N2Y8 1516 aa17.41■□□□□ 0.38
CELF4-203ENST00000420428 CLIP1P30622 1438 aa17.38■□□□□ 0.37
CELF4-203ENST00000420428 SUPT16HQ9Y5B9 1047 aaKnown RBP17.37■□□□□ 0.37
CELF4-203ENST00000420428 HIRIP3Q9BW71 556 aaPredicted RBP17.35■□□□□ 0.37
CELF4-203ENST00000420428 FKBP8Q14318 412 aa17.35■□□□□ 0.37
CELF4-203ENST00000420428 DDX10Q13206 875 aaKnown RBP17.33■□□□□ 0.36
CELF4-203ENST00000420428 FAM50AQ14320 339 aaKnown RBP17.33■□□□□ 0.36
CELF4-203ENST00000420428 GOLGA3Q08378 1498 aa17.32■□□□□ 0.36
CELF4-203ENST00000420428 BICRAQ9NZM4 1560 aa17.31■□□□□ 0.36
CELF4-203ENST00000420428 ERICH6Q7L0X2 663 aa17.31■□□□□ 0.36
CELF4-203ENST00000420428 TRIM52Q96A61 297 aa17.27■□□□□ 0.36
CELF4-203ENST00000420428 WRNQ14191 1432 aaPredicted RBP eCLIP17.27■□□□□ 0.36
CELF4-203ENST00000420428 CNGB1Q14028 1251 aaPredicted RBP17.26■□□□□ 0.35
CELF4-203ENST00000420428 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
CELF4-203ENST00000420428 P3H3Q8IVL6 736 aa17.23■□□□□ 0.35
CELF4-203ENST00000420428 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
CELF4-203ENST00000420428 BAZ1AQ9NRL2 1556 aaPredicted RBP17.21■□□□□ 0.35
CELF4-203ENST00000420428 EEA1Q15075 1411 aa17.2■□□□□ 0.34
CELF4-203ENST00000420428 KANK4Q5T7N3 995 aaPredicted RBP17.19■□□□□ 0.34
CELF4-203ENST00000420428 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
CELF4-203ENST00000420428 EIF4G1Q04637 1599 aaKnown RBP17.19■□□□□ 0.34
CELF4-203ENST00000420428 TSHZ2Q9NRE2 1034 aa17.16■□□□□ 0.34
CELF4-203ENST00000420428 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
CELF4-203ENST00000420428 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
CELF4-203ENST00000420428 ANP32CO43423 234 aa17.12■□□□□ 0.33
CELF4-203ENST00000420428 ANP32EQ9BTT0 268 aa17.12■□□□□ 0.33
CELF4-203ENST00000420428 SIN3AQ96ST3 1273 aa17.12■□□□□ 0.33
CELF4-203ENST00000420428 VPS8Q8N3P4 1428 aa17.1■□□□□ 0.33
CELF4-203ENST00000420428 CLSPNQ9HAW4 1339 aa17.09■□□□□ 0.33
CELF4-203ENST00000420428 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
CELF4-203ENST00000420428 POLR3GLQ9BT43 218 aa17.04■□□□□ 0.32
CELF4-203ENST00000420428 TOP2AP11388 1531 aaKnown RBP17.03■□□□□ 0.32
CELF4-203ENST00000420428 RAPGEF2Q9Y4G8 1499 aa17.03■□□□□ 0.32
CELF4-203ENST00000420428 DHX57Q6P158 1386 aaKnown RBP17.03■□□□□ 0.32
CELF4-203ENST00000420428 HNRNPUQ00839 825 aaKnown RBP eCLIP17■□□□□ 0.31
CELF4-203ENST00000420428 SMARCA2P51531 1590 aa16.97■□□□□ 0.31
CELF4-203ENST00000420428 CDK11AQ9UQ88 783 aaPredicted RBP16.95■□□□□ 0.3
CELF4-203ENST00000420428 BCL11AQ9H165 835 aa16.93■□□□□ 0.3
CELF4-203ENST00000420428 RBM19Q9Y4C8 960 aaKnown RBP16.93■□□□□ 0.3
CELF4-203ENST00000420428 CCNB3Q8WWL7 1395 aa16.91■□□□□ 0.3
CELF4-203ENST00000420428 SMARCA4P51532 1647 aa16.9■□□□□ 0.3
CELF4-203ENST00000420428 SENP3-EIF4A1A0A087X0R7 540 aa16.9■□□□□ 0.3
CELF4-203ENST00000420428 ARID3CA6NKF2 412 aa16.87■□□□□ 0.29
CELF4-203ENST00000420428 RAB3GAP2Q9H2M9 1393 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms