Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 REXO1L1P-201ENST00000379010 6598 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 HSPA8P5-201ENST00000456928 2069 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 MARK2P16-201ENST00000605714 1723 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 KRT17P5-201ENST00000332088 839 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 AP000358.1-201ENST00000456260 156 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 RHOQP1-201ENST00000555758 579 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 MIR3907-201ENST00000579424 151 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 HCG18-245ENST00000602550 559 ntTSL 4 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 AC015967.2-201ENST00000624092 234 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 AC006435.4-201ENST00000625037 234 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 AL356737.1-201ENST00000634391 234 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 AC103702.1-201ENST00000548801 2630 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 AL022313.4-201ENST00000562756 2046 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 LINC01815-202ENST00000641468 1409 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 BRD7P5-201ENST00000299197 1822 ntBASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
UBE2E2Q96LR5 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 AL583805.1-201ENST00000391389 531 ntBASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 BAX-205ENST00000391871 687 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 AC006987.1-201ENST00000413610 527 ntBASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 HMGA1P1-201ENST00000415560 1062 ntBASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 NAGK-204ENST00000443872 878 ntTSL 3 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 AL606495.2-201ENST00000605867 535 ntBASIC11.06□□□□□ -0.64
UBE2E2Q96LR5 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms