Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.29□□□□□ -0.12
MRM3Q9HC36 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MRM3Q9HC36 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MRM3Q9HC36 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
MRM3Q9HC36 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
MRM3Q9HC36 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
MRM3Q9HC36 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
MRM3Q9HC36 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
MRM3Q9HC36 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
MRM3Q9HC36 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
MRM3Q9HC36 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
MRM3Q9HC36 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 MIR1908-201ENST00000410394 80 ntBASIC14.28□□□□□ -0.12
MRM3Q9HC36 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 SALL4P6-201ENST00000429385 1691 ntBASIC14.28□□□□□ -0.12
MRM3Q9HC36 AC011742.3-201ENST00000439053 820 ntBASIC14.28□□□□□ -0.12
MRM3Q9HC36 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 AL359845.1-201ENST00000458202 1648 ntBASIC14.28□□□□□ -0.12
MRM3Q9HC36 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 AC090164.2-201ENST00000611487 516 ntBASIC14.28□□□□□ -0.12
MRM3Q9HC36 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
MRM3Q9HC36 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
MRM3Q9HC36 PPT1-213ENST00000641319 2388 ntBASIC14.27□□□□□ -0.12
MRM3Q9HC36 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.27□□□□□ -0.12
MRM3Q9HC36 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.27□□□□□ -0.12
MRM3Q9HC36 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
MRM3Q9HC36 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
MRM3Q9HC36 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
MRM3Q9HC36 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
MRM3Q9HC36 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.27□□□□□ -0.13
MRM3Q9HC36 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRM3Q9HC36 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
MRM3Q9HC36 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRM3Q9HC36 DPM3-202ENST00000368399 517 ntBASIC14.27□□□□□ -0.13
MRM3Q9HC36 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
MRM3Q9HC36 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.27□□□□□ -0.13
MRM3Q9HC36 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.27□□□□□ -0.13
MRM3Q9HC36 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.27□□□□□ -0.13
MRM3Q9HC36 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MRM3Q9HC36 AC009779.1-201ENST00000551138 283 ntBASIC14.27□□□□□ -0.13
MRM3Q9HC36 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.27□□□□□ -0.13
MRM3Q9HC36 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.27□□□□□ -0.13
MRM3Q9HC36 AL132994.2-201ENST00000603120 687 ntBASIC14.27□□□□□ -0.13
MRM3Q9HC36 AC005695.3-201ENST00000614522 232 ntBASIC14.27□□□□□ -0.13
MRM3Q9HC36 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
MRM3Q9HC36 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.27□□□□□ -0.13
MRM3Q9HC36 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
MRM3Q9HC36 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms