Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 BX088702.1-201ENST00000610784 235 ntBASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ANKRD55Q3KP44 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 PDIA3P1-201ENST00000471856 1510 ntBASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 AC009477.1-201ENST00000452936 217 ntBASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 AC135586.1-201ENST00000539323 574 ntBASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 AC120045.2-201ENST00000567334 178 ntBASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 STRCP1-201ENST00000509801 5328 ntBASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ANKRD55Q3KP44 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 TNRC18P1-201ENST00000502875 3650 ntBASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ANKRD55Q3KP44 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms