Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 TMCO5B-205ENST00000530020 894 ntBASIC19.25■□□□□ 0.67
CGNL1Q0VF96 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 USP39-207ENST00000450066 2086 ntTSL 2 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 HSPA7-201ENST00000445535 1927 ntBASIC19.25■□□□□ 0.67
CGNL1Q0VF96 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 SCARNA12-201ENST00000459155 270 ntBASIC19.25■□□□□ 0.67
CGNL1Q0VF96 OR5BD1P-201ENST00000532527 817 ntBASIC19.25■□□□□ 0.67
CGNL1Q0VF96 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 AC145285.5-201ENST00000562217 361 ntBASIC19.25■□□□□ 0.67
CGNL1Q0VF96 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 MIR6858-201ENST00000620733 67 ntBASIC19.25■□□□□ 0.67
CGNL1Q0VF96 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 AC068760.1-201ENST00000493579 1953 ntBASIC19.25■□□□□ 0.67
CGNL1Q0VF96 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CGNL1Q0VF96 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 SARS-202ENST00000369923 1882 ntTSL 5 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 TKT-201ENST00000296289 1931 ntTSL 5 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 AL139158.3-201ENST00000641212 1562 ntBASIC19.24■□□□□ 0.67
CGNL1Q0VF96 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 FTX-216ENST00000638985 1367 ntTSL 5 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC19.24■□□□□ 0.67
CGNL1Q0VF96 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 AP000911.2-201ENST00000534330 502 ntBASIC19.24■□□□□ 0.67
CGNL1Q0VF96 NEU3-207ENST00000534628 746 ntTSL 2 BASIC19.24■□□□□ 0.67
CGNL1Q0VF96 HERC2P11-201ENST00000562845 725 ntBASIC19.24■□□□□ 0.67
CGNL1Q0VF96 AC100756.2-201ENST00000569537 736 ntBASIC19.24■□□□□ 0.67
CGNL1Q0VF96 NUDT4P2-201ENST00000578341 546 ntBASIC19.24■□□□□ 0.67
CGNL1Q0VF96 BAP1-211ENST00000615113 489 ntBASIC19.24■□□□□ 0.67
CGNL1Q0VF96 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGNL1Q0VF96 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGNL1Q0VF96 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGNL1Q0VF96 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC19.23■□□□□ 0.67
CGNL1Q0VF96 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC19.23■□□□□ 0.67
CGNL1Q0VF96 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC19.23■□□□□ 0.67
CGNL1Q0VF96 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC19.23■□□□□ 0.67
CGNL1Q0VF96 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGNL1Q0VF96 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CGNL1Q0VF96 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGNL1Q0VF96 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CGNL1Q0VF96 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC19.23■□□□□ 0.67
CGNL1Q0VF96 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CGNL1Q0VF96 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms