Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA4Q9UN74 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA4Q9UN74 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA4Q9UN74 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.9■■□□□ 1.74
PCDHA4Q9UN74 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA4Q9UN74 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.9■■□□□ 1.74
PCDHA4Q9UN74 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA4Q9UN74 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHA4Q9UN74 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHA4Q9UN74 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
PCDHA4Q9UN74 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC25.89■■□□□ 1.74
PCDHA4Q9UN74 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.89■■□□□ 1.74
PCDHA4Q9UN74 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHA4Q9UN74 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHA4Q9UN74 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHA4Q9UN74 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHA4Q9UN74 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHA4Q9UN74 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 AC009102.2-201ENST00000606772 1639 ntBASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.88■■□□□ 1.73
PCDHA4Q9UN74 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.87■■□□□ 1.73
PCDHA4Q9UN74 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA4Q9UN74 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA4Q9UN74 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.87■■□□□ 1.73
PCDHA4Q9UN74 ANOS2P-203ENST00000472227 1816 ntBASIC25.87■■□□□ 1.73
PCDHA4Q9UN74 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA4Q9UN74 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.87■■□□□ 1.73
PCDHA4Q9UN74 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA4Q9UN74 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA4Q9UN74 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA4Q9UN74 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA4Q9UN74 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA4Q9UN74 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
PCDHA4Q9UN74 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA4Q9UN74 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA4Q9UN74 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA4Q9UN74 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA4Q9UN74 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA4Q9UN74 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDHA4Q9UN74 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA4Q9UN74 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.85■■□□□ 1.73
PCDHA4Q9UN74 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.85■■□□□ 1.73
PCDHA4Q9UN74 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHA4Q9UN74 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.85■■□□□ 1.73
PCDHA4Q9UN74 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHA4Q9UN74 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHA4Q9UN74 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHA4Q9UN74 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.84■■□□□ 1.73
PCDHA4Q9UN74 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.84■■□□□ 1.73
PCDHA4Q9UN74 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHA4Q9UN74 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDHA4Q9UN74 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA4Q9UN74 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA4Q9UN74 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
PCDHA4Q9UN74 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDHA4Q9UN74 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA4Q9UN74 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA4Q9UN74 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA4Q9UN74 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA4Q9UN74 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.83■■□□□ 1.73
PCDHA4Q9UN74 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA4Q9UN74 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHA4Q9UN74 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC25.83■■□□□ 1.72
PCDHA4Q9UN74 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.83■■□□□ 1.72
PCDHA4Q9UN74 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA4Q9UN74 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDHA4Q9UN74 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA4Q9UN74 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDHA4Q9UN74 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDHA4Q9UN74 AC092068.2-201ENST00000590491 1708 ntBASIC25.82■■□□□ 1.72
PCDHA4Q9UN74 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHA4Q9UN74 AC079630.1-202ENST00000618127 1840 ntBASIC25.81■■□□□ 1.72
PCDHA4Q9UN74 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA4Q9UN74 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA4Q9UN74 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA4Q9UN74 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.81■■□□□ 1.72
PCDHA4Q9UN74 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.81■■□□□ 1.72
PCDHA4Q9UN74 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDHA4Q9UN74 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHA4Q9UN74 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
PCDHA4Q9UN74 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA4Q9UN74 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.8■■□□□ 1.72
PCDHA4Q9UN74 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA4Q9UN74 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA4Q9UN74 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA4Q9UN74 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHA4Q9UN74 AL512631.2-201ENST00000604634 923 ntBASIC25.8■■□□□ 1.72
PCDHA4Q9UN74 AC131212.1-201ENST00000613771 668 ntBASIC25.8■■□□□ 1.72
PCDHA4Q9UN74 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms