Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.28■□□□□ 0.36
MS4A6AQ9H2W1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MS4A6AQ9H2W1 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MS4A6AQ9H2W1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.27■□□□□ 0.35
MS4A6AQ9H2W1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 AL451085.2-201ENST00000605085 799 ntBASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MS4A6AQ9H2W1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A6AQ9H2W1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.25■□□□□ 0.35
MS4A6AQ9H2W1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A6AQ9H2W1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.25■□□□□ 0.35
MS4A6AQ9H2W1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
MS4A6AQ9H2W1 AC004448.1-201ENST00000458332 883 ntBASIC17.25■□□□□ 0.35
MS4A6AQ9H2W1 KRT125P-201ENST00000546827 989 ntBASIC17.25■□□□□ 0.35
MS4A6AQ9H2W1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.25■□□□□ 0.35
MS4A6AQ9H2W1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A6AQ9H2W1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A6AQ9H2W1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.25■□□□□ 0.35
MS4A6AQ9H2W1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MS4A6AQ9H2W1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MS4A6AQ9H2W1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 AC009299.2-201ENST00000482477 511 ntBASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 Z92544.1-202ENST00000571933 1220 ntBASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 AC021242.3-201ENST00000607598 1377 ntBASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
MS4A6AQ9H2W1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MS4A6AQ9H2W1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MS4A6AQ9H2W1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MS4A6AQ9H2W1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MS4A6AQ9H2W1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MS4A6AQ9H2W1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.23■□□□□ 0.35
MS4A6AQ9H2W1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.23■□□□□ 0.35
MS4A6AQ9H2W1 AL117328.2-201ENST00000624617 1940 ntBASIC17.23■□□□□ 0.35
MS4A6AQ9H2W1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MS4A6AQ9H2W1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 AC239859.2-201ENST00000444165 318 ntBASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MS4A6AQ9H2W1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MS4A6AQ9H2W1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MS4A6AQ9H2W1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MS4A6AQ9H2W1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.21■□□□□ 0.35
MS4A6AQ9H2W1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms