Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2AP49459 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
UBE2AP49459 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
UBE2AP49459 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC14.23□□□□□ -0.13
UBE2AP49459 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2AP49459 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.23□□□□□ -0.13
UBE2AP49459 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.23□□□□□ -0.13
UBE2AP49459 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2AP49459 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2AP49459 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UBE2AP49459 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2AP49459 AL161729.1-201ENST00000604104 1402 ntBASIC14.23□□□□□ -0.13
UBE2AP49459 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
UBE2AP49459 AL022069.1-201ENST00000568025 1636 ntBASIC14.23□□□□□ -0.13
UBE2AP49459 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2AP49459 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2AP49459 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2AP49459 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
UBE2AP49459 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
UBE2AP49459 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC14.22□□□□□ -0.13
UBE2AP49459 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.22□□□□□ -0.13
UBE2AP49459 THA1P-201ENST00000590384 1145 ntBASIC14.22□□□□□ -0.13
UBE2AP49459 GAK-223ENST00000628912 497 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2AP49459 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2AP49459 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
UBE2AP49459 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2AP49459 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2AP49459 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2AP49459 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2AP49459 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
UBE2AP49459 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2AP49459 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2AP49459 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2AP49459 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2AP49459 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2AP49459 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2AP49459 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
UBE2AP49459 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC14.21□□□□□ -0.13
UBE2AP49459 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2AP49459 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2AP49459 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2AP49459 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2AP49459 STK32C-205ENST00000456004 607 ntTSL 2 BASIC14.21□□□□□ -0.13
UBE2AP49459 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14.21□□□□□ -0.13
UBE2AP49459 AC010980.1-201ENST00000587192 1142 ntBASIC14.21□□□□□ -0.13
UBE2AP49459 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC14.21□□□□□ -0.13
UBE2AP49459 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
UBE2AP49459 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.21□□□□□ -0.14
UBE2AP49459 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14.21□□□□□ -0.14
UBE2AP49459 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
UBE2AP49459 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2AP49459 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2AP49459 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
UBE2AP49459 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2AP49459 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
UBE2AP49459 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
UBE2AP49459 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC14.2□□□□□ -0.14
UBE2AP49459 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2AP49459 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2AP49459 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UBE2AP49459 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2AP49459 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2AP49459 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2AP49459 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2AP49459 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2AP49459 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC14.2□□□□□ -0.14
UBE2AP49459 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UBE2AP49459 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2AP49459 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2AP49459 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2AP49459 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2AP49459 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2AP49459 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2AP49459 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2AP49459 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
UBE2AP49459 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
UBE2AP49459 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2AP49459 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2AP49459 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2AP49459 AL033527.3-201ENST00000566366 1196 ntBASIC14.19□□□□□ -0.14
UBE2AP49459 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2AP49459 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
UBE2AP49459 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2AP49459 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
UBE2AP49459 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
UBE2AP49459 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
UBE2AP49459 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
UBE2AP49459 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
UBE2AP49459 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2AP49459 HCG11-201ENST00000411553 5696 ntBASIC14.19□□□□□ -0.14
UBE2AP49459 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2AP49459 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
UBE2AP49459 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC14.18□□□□□ -0.14
UBE2AP49459 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC14.18□□□□□ -0.14
UBE2AP49459 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBE2AP49459 YBX1P4-201ENST00000392794 808 ntBASIC14.18□□□□□ -0.14
UBE2AP49459 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
UBE2AP49459 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
UBE2AP49459 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
UBE2AP49459 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms